Ipomoea nil (Japanese morning glory): 109167299
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Entry
109167299 CDS
T04663
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
ini03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109167299
03460 Fanconi anemia pathway
109167299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109167299
03400 DNA repair and recombination proteins [BR:
ini03400
]
109167299
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109167299
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109167299
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109167299
Bloom's syndrome complex (BTR)
109167299
FA (Fanconi anemia) pathway
109167299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
FXMRP1_C_core
Herpes_UL6
Motif
Other DBs
NCBI-GeneID:
109167299
NCBI-ProteinID:
XP_019171863
LinkDB
All DBs
Position
Un
AA seq
1196 aa
AA seq
DB search
MSRENHMSESNWGEESGSGDKLPKVNWSQHASSLNNFSSQDNLLGSNFLFSLPEQKPHAR
EAMAVRSTICPVPNVRLSDPLAEKAWQLLSSLRLSSKSYTKPGKTLPLSIDASASAIGKS
GQANKKWSSNVNSTSFEHAPLHQNFSISNNEVGESRKSVGASFPLHAQVGNFVTRQNTVH
TSMANTSQNRPSDGSASSGADDVNKINGSNGTFVAGVDDDDILEQIDVDQIVMEHYQSNC
TPQPSVSKFPSFTPITSSKCMARSEDTNLPLELSSNCSHGLQLGLCPEASNHLQEMKDKL
ICISNDLLDNVTNLSPDQVENLRKERLQLNTQIQQLEKYLRTVSVNEERIMSQFSASTTS
SAIQYETPRTVPFRIDPMRLETQYQYNGPVGFDQWNSSSMSFASNDISTAPINREAYIPT
YIEVNYVDGSSDKKWSSRDFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGNDVFVLM
PTGGGKSLTYQLPALISPGITLVISPLVSLIQDQIMHLLQVNIPATYLSASMEWAEQQEI
FRELNSGVCKYKLLYVTPEKVAKSDVLLRHLERLHVSDSLSRIVIDEAHCVSQWGHDFRP
DYQCLGILKQKFPNVPVLALTATATLSVKEDVVQALGLSNCILFRQSFNRPNLRYSVVPK
TKKCLEDIDAFIRENHFDECGIIYCLSRMDCEKVSEKLQDYGHKAAYYHGSMDAAQRAHV
QKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQPSSCVL
YYSYSDYIRVKHMISQCNVEQSPFTPGYGRSSMATSGKILETNTDNLLRMVSYCENDVDC
RRLLQLIHFGEKFDAVNCMKTCDNCSKSQSCIDKDVTGTAKQLVELVKMTGQQFSSAHIL
EVFRGSLNQFVKKHRHETLSLHGAGKHLAKGEASRVLRHLVTEDILVEEVKKSDMYGSTS
SVLKVNEFKANNLFAQGHIVRLRFPSSAKASKPSRVETTPAKGTLTSMMQQSEVEVDLDL
SAKLYNALRMLRTNLVKEGGERFMAYHIFGNATLQLISKRVPRNKVELREINGIGKNKVD
KYGDRVLETIEATIRGHYSNSGSSNDSTDSGKRRRESANMANAGCEEDDFAAESTARSKK
KAPKKHRKQDEPIDYADLGYFDDAFMDDADLEENSDPQINGGNGGRVLPSWRAPGT
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggagaatcacatgagtgaaagcaattggggcgaggaatctggctctggagac
aagctccctaaagttaattggtctcaacatgccagctctctcaataacttttccagtcaa
gataacttgctaggatccaatttccttttttccctaccagaacaaaagcctcatgccaga
gaagcaatggctgtaaggtctacaatttgtccagtccctaatgtgagattgtctgaccct
ttagctgagaaggcttggcaacttctatccagccttcggttgtcttccaagagctacact
aaacctgggaaaactctaccactaagtatagatgctagtgcttctgccataggaaaatct
ggtcaagctaataaaaaatggtcttctaatgtgaatagcacttcctttgagcatgcccca
ttgcatcagaacttcagcataagtaacaatgaagttggagaatccagaaaatctgtaggg
gcttcttttccattgcatgcacaagtgggaaactttgtaactaggcagaatactgtacac
acatcgatggcaaatacttctcagaatcgtccctctgatggatcagccagcagtggtgca
gatgatgtaaacaaaataaatgggtctaatggaacttttgtggctggagttgatgatgat
gatatactagagcaaattgatgttgaccaaatagttatggagcattatcaatccaactgt
acacctcaaccatcagtttcaaaatttccatcttttactccgattacgagttctaaatgt
atggcgagatctgaagacacaaatttgcccttggagttgtcctcaaattgcagtcatggt
ttgcagctaggactttgtcctgaggcttcaaatcatttacaagagatgaaggataagtta
atttgtatttcaaatgatctacttgacaatgttactaatctcagtccagatcaagttgaa
aatctgcgtaaagaaagattgcagttgaatacacaaattcaacagcttgaaaagtatctc
cgcacagtatcagtcaatgaggaaagaataatgtcacagttctctgcatccaccacatct
tccgctattcaatatgagactcctcgaacagttccattcaggattgatcccatgaggctt
gaaacacagtatcaatataatggtccagttggatttgatcaatggaattcttcatcaatg
tcatttgcatccaatgatatttcaactgctccaatcaatagagaagcttatataccaaca
tatatagaagtcaattatgttgatggttcaagtgacaaaaagtggagcagccgagacttc
ccttggacaaagaagcttgaggctaacaacaaaaaggtatttggcaatcactcttttcgc
cccaaccaaagggaggtgattaatgctactatgagtggaaatgatgtatttgtcctaatg
ccaactgggggaggaaaaagtttgacttaccagcttccagctctcatttctcctgggatt
actttggtcatttcacctcttgtttcactcattcaagaccagataatgcatctgctacag
gtcaacattcctgctacttatcttagtgccagcatggaatgggctgagcaacaggagatc
tttagagaacttaattcaggcgtttgcaaatacaaacttttatatgtcaccccagagaaa
gttgctaaaagtgatgttctattgcgacacttggagagactacatgtcagtgattcactt
tctagaattgttattgacgaagcacattgtgtaagccaatggggacatgattttaggcca
gactatcagtgtctaggtatcctgaaacagaagtttccaaatgtacctgttcttgccttg
actgctactgcaacactcagcgtcaaggaagatgttgttcaagctcttggtctttccaac
tgtattctctttcggcagagttttaatcgccctaatttacgatattctgtagtcccaaag
acaaagaagtgtttggaagacattgatgccttcataagagaaaatcattttgatgaatgt
ggaatcatctattgtctttcaagaatggattgtgaaaaagtttctgaaaagttgcaggat
tatggacataaagcagcatattaccatggcagcatggatgctgctcagcgtgcacatgtt
cagaaacaatggagcaaggatgaggtcaatattatttgtgcaactgttgcgtttggaatg
ggtatcaataagccagatgttcgttttgtcattcatcattctctaccaaaatctatagaa
ggctaccatcaggagtgtggccgagctggtagagatggccaaccttcatcttgtgtgttg
tactacagctacagtgattatataagagtcaagcatatgattagccaatgcaatgtagag
caaagccccttcacacctggatatggtcgttccagcatggcaacctctgggaagattctg
gaaacaaacactgacaatcttttgagaatggttagctactgtgagaacgatgttgactgt
aggcgcctccttcagcttattcattttggtgaaaaatttgatgctgtcaactgcatgaaa
acttgtgacaattgttcaaaatctcagagctgcattgacaaggatgttactggaactgca
aaacaattagtcgagttagtgaagatgactgggcagcagttttcatcagctcacatcttg
gaagtttttaggggttccctaaaccaatttgtcaagaaacatagacatgaaaccttgagc
ctgcatggagctggaaaacatctagccaaaggtgaagcatcccgtgtgttgcgccacctt
gttactgaagatattttagtggaagaggttaaaaaaagtgatatgtatggatccacatca
tcagtcttgaaggtgaatgaattcaaagccaacaatctctttgcccaaggacatatagtc
agattaagattcccatcatccgccaaggcatctaagccgagtagagtagaaacaactcct
gcaaaaggcacactaacatcaatgatgcaacaatctgaggttgaggttgacctggacctg
tcagccaaactgtataatgcactacggatgcttcgaactaaccttgttaaggaaggtgga
gagcgattcatggcttaccatatatttgggaatgctacattgcagctcataagcaagagg
gtacctagaaataaagttgagctgcgagagatcaatggcattggcaagaataaagtagac
aaatatggcgatcgagtattggaaaccatagaggccaccattaggggccactactcgaac
agcggcagtagcaacgacagcactgattcaggcaagaggagaagggaaagcgcaaacatg
gccaatgcagggtgcgaagaagacgacttcgccgcggaaagcaccgcccgctccaagaaa
aaggcgccaaaaaagcaccggaaacaggacgagcctattgactacgcggatctaggatac
ttcgacgatgcatttatggacgacgctgatctcgaggaaaactccgatccccaaatcaat
ggcggcaatggagggagagtgctaccttcatggcgggcgccggggacttag
DBGET
integrated database retrieval system
