Ipomoea nil (Japanese morning glory): 109167602
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Entry
109167602 CDS
T04663
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109167602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109167602
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109167602
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109167602
NCBI-ProteinID:
XP_019172189
LinkDB
All DBs
Position
Un
AA seq
423 aa
AA seq
DB search
MAEIRSSGKPIDQLLEKVLSMNILSSDYFRDLLRLKTYHEVIDEIYNQVDHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYLADPKTIWSWYEPYL
KDDEEFSPGSSGRMTTMGVYVRDLLLGQYYFDTLLPRIPVPVMRTVVSNLENMKLPTKPS
GSTGDSTRGSEETARRPPSVKASLSVSFGQRAPHRASTRDSSPIRRTLTSSPYDRNGDDA
KRSPSYRRSQSRDIPDRDRDKDLDRERDRQHDRDRDRDRDRDRERGRDRDRERRYDYDRE
RDRERGRRHDYDRERERDRDRRYGDYDRRGSRESRRDHHERSRSRSRSRSKSQSMHERGG
SLDHRRSPPAQDGSKEKTSVSSNLAKLKDLYGDLGSSQKEDTSNNRRDSGMEEVIRLGGS
TWR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgagattcggagttctgggaagccaattgatcaattgttggagaaggttctctct
atgaacattctttcttctgattactttagagaccttttgcgtctgaagacatatcatgaa
gtgattgatgaaatctataatcaagttgaccatgttgagccatggatgactggcaactgt
cggggtccttcaacagcattctgccttctgtacaagttttttactatgaaacttactgtc
aaacaaatgcatggccttttgaagcaccctgattcaccatatatcagagctgtgggtttc
ctatacttgagatatcttgcagatccaaagacaatatggagttggtatgagccgtatctt
aaagatgatgaggaattctctcctggatctagtggtagaatgacaaccatgggtgtatat
gtgcgtgacttgctcctaggacagtactacttcgatacactattacctcgtatcccagtt
cctgtaatgcgtactgttgtatccaatcttgagaacatgaagcttcctactaagccttct
ggatcaactggggattctactcgagggtctgaagaaactgcacgccggccaccttctgtg
aaagcttccctctctgtctcgtttggtcagcgcgcacctcatcgtgcatcaacaagagat
tcatctcctatccgtcgtaccttgacatcatctccttatgacaggaacggtgatgatgca
aagcggtctcccagctatcgtcgtagtcaaagccgtgacatacctgacagagacagggat
aaagacctggaccgtgagagagaccgacagcatgatagggatagggatagggatcgcgac
cgagacagggagaggggtagggatcgggatagagagaggaggtatgattatgatagagag
cgggatagggagagaggtagaaggcatgattatgatagagaacgggaaagggatcgagac
agaagatatggggattatgacagaagggggtccagggaaagtagaagggatcatcatgag
aggagtcggagccgaagtagaagtagaagtaagagtcagagcatgcatgagcgaggtgga
agtcttgatcatcggcggagtcctccagcacaagatggaagcaaagagaagacatctgtt
tctagcaacctggctaaacttaaagatctctatggtgacttgggtagcagccagaaggaa
gacacaagcaataacaggagggacagtggtatggaggaggttatccgactcggtggctct
acttggaggtag
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