KEGG   Ipomoea nil (Japanese morning glory): 109167602
Entry
109167602         CDS       T04663                                 
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109167602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109167602
Spliceosome [BR:ini03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    109167602
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 109167602
NCBI-ProteinID: XP_019172189
LinkDB
Position
Un
AA seq 423 aa
MAEIRSSGKPIDQLLEKVLSMNILSSDYFRDLLRLKTYHEVIDEIYNQVDHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYLADPKTIWSWYEPYL
KDDEEFSPGSSGRMTTMGVYVRDLLLGQYYFDTLLPRIPVPVMRTVVSNLENMKLPTKPS
GSTGDSTRGSEETARRPPSVKASLSVSFGQRAPHRASTRDSSPIRRTLTSSPYDRNGDDA
KRSPSYRRSQSRDIPDRDRDKDLDRERDRQHDRDRDRDRDRDRERGRDRDRERRYDYDRE
RDRERGRRHDYDRERERDRDRRYGDYDRRGSRESRRDHHERSRSRSRSRSKSQSMHERGG
SLDHRRSPPAQDGSKEKTSVSSNLAKLKDLYGDLGSSQKEDTSNNRRDSGMEEVIRLGGS
TWR
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggctgagattcggagttctgggaagccaattgatcaattgttggagaaggttctctct
atgaacattctttcttctgattactttagagaccttttgcgtctgaagacatatcatgaa
gtgattgatgaaatctataatcaagttgaccatgttgagccatggatgactggcaactgt
cggggtccttcaacagcattctgccttctgtacaagttttttactatgaaacttactgtc
aaacaaatgcatggccttttgaagcaccctgattcaccatatatcagagctgtgggtttc
ctatacttgagatatcttgcagatccaaagacaatatggagttggtatgagccgtatctt
aaagatgatgaggaattctctcctggatctagtggtagaatgacaaccatgggtgtatat
gtgcgtgacttgctcctaggacagtactacttcgatacactattacctcgtatcccagtt
cctgtaatgcgtactgttgtatccaatcttgagaacatgaagcttcctactaagccttct
ggatcaactggggattctactcgagggtctgaagaaactgcacgccggccaccttctgtg
aaagcttccctctctgtctcgtttggtcagcgcgcacctcatcgtgcatcaacaagagat
tcatctcctatccgtcgtaccttgacatcatctccttatgacaggaacggtgatgatgca
aagcggtctcccagctatcgtcgtagtcaaagccgtgacatacctgacagagacagggat
aaagacctggaccgtgagagagaccgacagcatgatagggatagggatagggatcgcgac
cgagacagggagaggggtagggatcgggatagagagaggaggtatgattatgatagagag
cgggatagggagagaggtagaaggcatgattatgatagagaacgggaaagggatcgagac
agaagatatggggattatgacagaagggggtccagggaaagtagaagggatcatcatgag
aggagtcggagccgaagtagaagtagaagtaagagtcagagcatgcatgagcgaggtgga
agtcttgatcatcggcggagtcctccagcacaagatggaagcaaagagaagacatctgtt
tctagcaacctggctaaacttaaagatctctatggtgacttgggtagcagccagaaggaa
gacacaagcaataacaggagggacagtggtatggaggaggttatccgactcggtggctct
acttggaggtag

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