KEGG   Ipomoea nil (Japanese morning glory): 109168198
Entry
109168198         CDS       T04663                                 
Name
(RefSeq) 60S ribosomal protein L11-like
  KO
K10752  histone-binding protein RBBP4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03082  ATP-dependent chromatin remodeling
ini03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109168198
   03083 Polycomb repressive complex
    109168198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ini03036]
    109168198
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     109168198
  Histone modification proteins
   HAT complexes
    HATB complex
     109168198
   HDAC complexes
    Sin3A-HDAC complex
     109168198
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     109168198
    PRC2.2
     109168198
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     109168198
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109168198
  Chromatin remodeling factors
   NuRD complex
    109168198
   NuRF complex
    109168198
   NuRF complex (fruit fly)
    109168198
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 CAF1C_H4-bd Beta-prop_EML_2 WDR55 WD_LRWD1 WD40_RFWD3 Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 109168198
NCBI-ProteinID: XP_019172792
LinkDB
Position
Un
AA seq 381 aa
MSSSSRATTSQSRTVDDRFVSHNLDSPTPSVEWLPGGEEPEGKPYTVQKLIVGTCTPENE
QSSLMLVQVKLNREDWDGKESSSSIEIGKTRRVQKINHDGVVNRARYMPQNPSIIATKTG
RAELFIFDCTKHPSNPPEEGVCSPDLRLTGHKDKGLGLSWSPFKKGHLLSGSEDGQVCFW
DVNATPHDNTLEAMRIFDKQHGCVEDVAWHMKDENLFGSVGEDKHLHIWDTRIPAIKLNQ
SVLCHDAKVNSLAFNPICGWVVATGSSDKKVKMFDLRKISPFLHILECPLQEEVDHVRWN
HKHEKFLASSSGRKILVWDISRIGRAQTSEEAKGGPPEFAFLHSAHTDSITDFSWSPTYG
LAIASAAKDNSLQLWRMREVM
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgagttctagttcgcgggcaaccacgagccaatcacgcacggtggacgataggttcgtc
agtcacaacctcgacagcccgacgccctccgtcgaatggctccccggcggggaggagccg
gaggggaagccttatactgtccagaaactgatcgtcggaacttgcacgccggagaatgaa
caaagcagccttatgctcgttcaggttaagctgaatcgcgaagattgggatggtaaagaa
tccagttcctctattgagatcgggaagacaagaagagtgcagaaaataaatcatgatggg
gtagttaaccgggctcgttacatgccacaaaacccgagtattattgctaccaagacaggc
agggctgagcttttcatttttgattgtaccaaacatccgtcaaaccctcccgaggagggt
gtttgcagccctgatttgaggttaactggtcacaaagacaaagggcttggcttgtcctgg
agtccatttaagaagggtcatttgttaagtggctcagaggatggtcaagtttgcttttgg
gacgttaatgccactccacatgataatacacttgaggctatgcgtatatttgataaacag
catggatgtgttgaggatgtagcttggcatatgaaggatgagaacttatttggttcagtt
ggagaagataaacatctacatatatgggatacacgcattccagcaatcaagcttaatcaa
tctgtactttgtcatgatgctaaggttaactccctggcatttaatcctatttgtggatgg
gttgtagcaactggatcttctgataagaaagtcaaaatgtttgatctgcgcaagatttcg
cctttcctccatatcttggaatgtccattgcaggaggaggttgaccatgttaggtggaat
cacaagcatgagaagtttttagcttcaagttctggcaggaagattcttgtttgggatatt
agcaggattgggcgcgcacaaaccagtgaggaggctaaaggaggacccccggagtttgcc
tttcttcactctgcccacacggatagcattacagacttctcatggagcccaacctacggc
ttggcgatcgctagtgcagccaaggacaacagtctacagttatggcggatgcgagaagtc
atgtaa

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