Ipomoea nil (Japanese morning glory): 109168198
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Entry
109168198 CDS
T04663
Name
(RefSeq) 60S ribosomal protein L11-like
KO
K10752
histone-binding protein RBBP4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
ini03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109168198
03083 Polycomb repressive complex
109168198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ini03036
]
109168198
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109168198
Histone modification proteins
HAT complexes
HATB complex
109168198
HDAC complexes
Sin3A-HDAC complex
109168198
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109168198
PRC2.2
109168198
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109168198
Heterochromatin formation proteins
Other heterochromatin formation proteins
109168198
Chromatin remodeling factors
NuRD complex
109168198
NuRF complex
109168198
NuRF complex (fruit fly)
109168198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_EML_2
WDR55
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
109168198
NCBI-ProteinID:
XP_019172792
LinkDB
All DBs
Position
Un
AA seq
381 aa
AA seq
DB search
MSSSSRATTSQSRTVDDRFVSHNLDSPTPSVEWLPGGEEPEGKPYTVQKLIVGTCTPENE
QSSLMLVQVKLNREDWDGKESSSSIEIGKTRRVQKINHDGVVNRARYMPQNPSIIATKTG
RAELFIFDCTKHPSNPPEEGVCSPDLRLTGHKDKGLGLSWSPFKKGHLLSGSEDGQVCFW
DVNATPHDNTLEAMRIFDKQHGCVEDVAWHMKDENLFGSVGEDKHLHIWDTRIPAIKLNQ
SVLCHDAKVNSLAFNPICGWVVATGSSDKKVKMFDLRKISPFLHILECPLQEEVDHVRWN
HKHEKFLASSSGRKILVWDISRIGRAQTSEEAKGGPPEFAFLHSAHTDSITDFSWSPTYG
LAIASAAKDNSLQLWRMREVM
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagttctagttcgcgggcaaccacgagccaatcacgcacggtggacgataggttcgtc
agtcacaacctcgacagcccgacgccctccgtcgaatggctccccggcggggaggagccg
gaggggaagccttatactgtccagaaactgatcgtcggaacttgcacgccggagaatgaa
caaagcagccttatgctcgttcaggttaagctgaatcgcgaagattgggatggtaaagaa
tccagttcctctattgagatcgggaagacaagaagagtgcagaaaataaatcatgatggg
gtagttaaccgggctcgttacatgccacaaaacccgagtattattgctaccaagacaggc
agggctgagcttttcatttttgattgtaccaaacatccgtcaaaccctcccgaggagggt
gtttgcagccctgatttgaggttaactggtcacaaagacaaagggcttggcttgtcctgg
agtccatttaagaagggtcatttgttaagtggctcagaggatggtcaagtttgcttttgg
gacgttaatgccactccacatgataatacacttgaggctatgcgtatatttgataaacag
catggatgtgttgaggatgtagcttggcatatgaaggatgagaacttatttggttcagtt
ggagaagataaacatctacatatatgggatacacgcattccagcaatcaagcttaatcaa
tctgtactttgtcatgatgctaaggttaactccctggcatttaatcctatttgtggatgg
gttgtagcaactggatcttctgataagaaagtcaaaatgtttgatctgcgcaagatttcg
cctttcctccatatcttggaatgtccattgcaggaggaggttgaccatgttaggtggaat
cacaagcatgagaagtttttagcttcaagttctggcaggaagattcttgtttgggatatt
agcaggattgggcgcgcacaaaccagtgaggaggctaaaggaggacccccggagtttgcc
tttcttcactctgcccacacggatagcattacagacttctcatggagcccaacctacggc
ttggcgatcgctagtgcagccaaggacaacagtctacagttatggcggatgcgagaagtc
atgtaa
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integrated database retrieval system