Ipomoea nil (Japanese morning glory): 109168486 Help Entry 109168486         CDS       T04663                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini04142   Lysosome biogenesis ini04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ini00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     109168486    04148 Efferocytosis     109168486  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ini04131]     109168486 Membrane trafficking [BR:ini04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     109168486 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_WDR35 TPR_MalT AlaDh_PNT_N zf-HC5HC2H_2 Motif Other DBs NCBI-GeneID:  109168486 NCBI-ProteinID:  XP_019173058 LinkDB All DBs Position Un AA seq 1004 aa AA seqDB search MVHSAYDSFVLLNDCPTKIDAVESYGSNLFIVCSDGSLRVYVPESTRSDRSTASEFHHHT SELRKERYVLERTVNGFSKRAMLAMEVIASRELLLSLSESIAFHRLPNLETLAVITKAKG ANVYSWDDRRGYLCFARQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMAWCGDNICLGIRR DYMILNTTNGAMSEVFPSGRTAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRICWS EAPAVVVIQKPYAIGLQPRHIEIRSLRVPYPLIQTAVLRNVRRLVQSNNAVIVALENSVF GFFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRAAKEQSIHIRYAHYLYENGSYE EAMEHFLASQVEITYVLSLYPSIILPKSAVIPEPEKFVDMSGDYPNLSRGSSSLSDDMES NTHILESDETDIESKKMSHNTLMALIKFLQKKRYGIIEKATAEGTEEVVSDAVGDSFVSY GTSRSKKTIKGRTNTPIGSVARDMAAILDTALLQALILTGQASAALDLLRGVNYCDVKIC EEFLQKRSQYFCLLELYKTSGMHREALKLLHQLVEESTSDQASAELSQKFKPELIIEYLK PLCETDPMLVLEFSMVVLESCPMQTIELFLSGNIPADMVNSYLKQHAPNLQATYLELMLA MNENSISGNLQNEMVQIYLSEVLDWYTELNSQKNWDEKTYSPTRKKLLSALESVSGYNPD ILLKRLPPDALFEEHAILLGKMNQHELALSIYVHKLHVPDLALSYCDRVYESGVQQNSVK SHSNIYLTLLQIYLNPRKTTKNFENRINNLVSSQSPGIPKPGPGPTTKLRGNRFKKIAEI EGAEDTRISPSGTDSNKSDGDVDDIGEEGVSTIMLDQVLDLLGRRWDRINGAQALKILPR ETKLENLLPFLGPLLRKSSEAHRNFSVIRSLRESENLQVKDELYTQRKAVVKINGDSMCS LCNKKIGTSVFAVYPNGKTIVHFVCFKDSQSMKAVTRGSQSRKR NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atggtgcatagcgcttacgactcattcgtgctcctcaatgattgccccacgaagatcgac gccgtcgaatcgtacggctcaaacttattcatcgtctgctcggatggatcgctccgcgtg tacgtacccgaatccacccgctccgaccggtcgacggcgtcggagttccatcaccacacc tcagagcttcgcaaggaacgctacgtcctggaacggactgtgaacggattctccaagagg gctatgctggcaatggaggtgatcgcgtcgcgggagctgcttttatcgctctccgagtcc atcgcgttccatcggttgcccaatttggagaccctggccgtgattacgaaggcaaaaggg gcgaatgtgtactcgtgggacgataggagagggtatctttgcttcgcgagacaaaaaaga gtttgtattttcagacatgacggaggaaggggtttcgtagaggttaaagaatttggagta ccagatacggttaagtcaatggcttggtgcggcgataatatttgcttgggaattagaaga gattacatgatattgaataccacaaatggagcaatgtctgaggtgtttccttcagggagg actgccccccctcttgtggtgtcacttccatctggagaacttcttttggggaaggataat attggagtatttgttgaccaaaacggtaagctacttcaggaaggcaggatttgttggtct gaagctcctgctgttgttgttattcaaaagccatatgcaataggtctccaaccaagacat attgagatacgttctcttcgtgttccttacccattgatacagacagctgtcctccgaaat gttcgccgtcttgttcaaagcaacaatgctgtaattgttgctctagagaactctgttttt ggattctttcctgttcctttaggtgcacagattgtacaactaactgcatctggcaacttt gaggaggccttggctttgtgcaaattgcttccaccagaagattccagccttagagctgca aaggaacagtcaattcatataagatatgcacactatttatatgaaaatgggagctatgag gaggccatggaacattttctggcatctcaagtagaaattacttatgttctttctttatac ccatccatcattcttcccaaatctgcagtaattcctgagccagagaaatttgtggatatg agtggggattatccaaacctttccagaggttcctctagcttgtcggatgatatggaatca aatactcatatattggagtctgatgagacagatattgaatccaaaaaaatgagccacaat actttgatggctcttattaagtttctgcagaaaaaaagatatggtattattgaaaaagct actgccgagggaactgaagaggttgtttcagatgctgtaggagatagttttgtttcctat gggactagtcggtccaagaaaacaatcaagggccgtacaaatactcctatcggctcagtt gctcgggatatggcagctatactggacactgcacttctacaagcactgattttaactgga caggcttcagctgctctggatttgctgagaggtgttaactattgtgatgtaaagatctgt gaggaattcctgcagaaaaggagtcagtatttctgtttgctagaactttacaaaaccagt ggaatgcatcgtgaagcgcttaaacttcttcatcaattggtggaagagtccacgtcagac caagcatctgctgagctgtcacagaaattcaagcctgagttgatcattgaatacctaaaa cctctgtgtgagactgatcccatgcttgttttggagttctcaatggtcgtccttgaaagt tgtccgatgcaaactattgagctgttcttatctgggaacattccggcagacatggtcaat tcttacttaaagcagcatgctcctaacttgcaggctacatatttggaacttatgcttgca atgaatgaaaatagcatttccggaaatcttcagaatgaaatggtgcaaatctatctttca gaagtgcttgattggtatactgaacttaattctcagaagaactgggatgagaaaacttat tccccaacaagaaaaaagctactgtctgctctggagagtgtctctgggtacaatccagat attttattgaagcgacttcctccagatgcattgtttgaggaacatgctatcctgttggga aaaatgaatcaacatgagcttgccctatccatttatgtacacaagcttcatgttcctgat cttgctctctcctattgtgatcgagtatatgagtctggagttcagcaaaattcagtaaaa tctcacagcaatatatacctcacactactgcaaatctatttgaaccctcggaagactaca aaaaactttgaaaatagaatcaataatctggtatcatcccagagccctggaatacctaag cctggcccaggacctacaactaaactcaggggaaaccgctttaagaaaattgcagaaatt gaaggtgctgaggacactcgaatcagtccaagtggcacagatagtaataagagtgacggt gatgtagacgatattggtgaggaaggagtttctactattatgcttgatcaggtccttgat ctgttgggacgaaggtgggaccgaatcaatggagctcaggccttgaaaatcttaccacgg gagaccaaattggagaacttgcttccgtttcttggacctcttctgagaaaatcaagtgaa gcacaccgaaacttttcagtgatcaggagtttgagggagagtgaaaacctacaggtgaaa gatgagctctatacccagaggaaagcagtggtgaagatcaacggtgatagcatgtgctct ctttgcaacaagaagatagggacgagtgtttttgctgtgtatccaaatggcaagacaatt gtacacttcgtttgctttaaagattcgcagagcatgaaagctgttacaaggggctctcag tcgcgcaagagatga

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