Ipomoea nil (Japanese morning glory): 109168741
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Entry
109168741 CDS
T04663
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109168741
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ini01001
]
109168741
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109168741
03036 Chromosome and associated proteins [BR:
ini03036
]
109168741
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
109168741
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109168741
Protein kinases [BR:
ini01001
]
Serine/threonine kinases: Other
TAF1 family
109168741
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109168741
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
109168741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
109168741
NCBI-ProteinID:
XP_019173258
LinkDB
All DBs
Position
Un
AA seq
1875 aa
AA seq
DB search
MGYESGSASHDGRDEDDDDEYEEAGGGNHLLGFMFGNVDYSGDLDVDYLDEDAKEHLAAL
ADKLGPSLTDIDLSVKSPQTHSDAAEQDYDDKAEDAVDYEDIDEQYEGPEVQTATEEDFL
LPKKDYFSKEIAVTTLNNTASVFDDENYDEDDTEENKEQDVLKNSTEGQPFPETGKYNHD
FKEACEGEKLAKDVIPSYSEELAKDALPLDSPESVDFADFQEESVEPFDGKSSMPLPILC
IEDGLPILRFSEIFGIHETRKKIEKRDHRYSVAKEKYNLDSSELLEDDEEEILRGSYKDF
PWLKVACVTEDNISDDELGSFQGKGRIGATADDRKKDFCSSAEPMKSNMPQNLSADWSSP
SCPKFYPLDQQDWEDGIIWGNSPASSAETAESFETSGPNFGASFDKEMDLEADSGTSELG
IESNEKDKNSFIHVQSVSVEPFGSREISGQTDVPLLAGRFHPQLLRLESRLDVNQQDNTE
DGEYIAQEKTCSDALRRFSELTLLNKDVEEGSWLDNIIWEPEQAIAKPKLIYDLQDKQML
FEILDSKDSTSLQLHAGAMITTGLGKPNVGDSAELLHGGPTGRFNIANDKFYSNRKSSQQ
SKSHSKKRTAHVLKVLHSIPALKLETMKAKLSNKDLANFHRPKALWYPHDNEVVLKGQWK
LPTQGPMKVILKSLGGKGSKLHVDFEETVSSLKAKASKKLDFKLSEPVKIFYSGRELEDD
RSLAEQNVQPNSLLHLVRSKIYLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLME
YCEERPLLLGNVGMGARLCTYYQKSTPNDQTGVLMRNENNNLGSVLILDPADKSPFLGDI
KPGCSQSSLETNMYRAPIFQHKVSSTDYLLVRTAKGKLSIRRIDRIDVVGQQEPHMEVMS
PGSKGVQTYIMNRLSVYMYRKFHADEKRGVRPFIHADELSAQFPSLSETFLRKRLRNCAD
MQRGSNGQLIWVTKSSFRIPSEEELRRMVTPENVCAYESMQAGLYRLKRLGITRLTQPTG
LSSAMNQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRGNIERLEITGVGDPSG
RGLGFSYVRTTPKAPVSNAVTKKKAALAKGTTVTGTDADLRRLSMEAAREVLLKFNVPED
QIAKQTRWHRIAMIRKLSSEQAASGVKVDATTISKYARGQRMSFLQLQQQTREKCQEIWD
RQVQNLSAVDGEEIESDAEVNSDLDSFAGDLENLLDAEECEEGDEGACDLKHDKIDGVKG
LKMRRRPFQAQLEEEIEDEAAEAAELCRMLLDDEEAERKKKKKEKSVGERVGAPEAQSRF
VMENTERGKKTSVTTKAVIKPDVLNAFKEDIAGDQSEADGLVAKRSFSSKVKPKKGKIVD
VAEPGLLKKKVKILADGIQNVKEKKSARESFVCGACGQLGHMRTNKHCPKYGEDLVEPRP
ENADPEKASAKPTSSEHADPPQPKPPMKKIVQRSATKIAVVETQDDEKSSSKAKVLKFKC
GSTDKLPDKPTPATSLSSDKPAMSDGETGSKSVVKLNKLKFSNNMKQPVEETAVESRKPA
ILIKPLVEAGDKPRKKIVIRQSKDSSNAEDVSQEGSSGFEHRKMKKIVELSYADMYTDQG
SYHFSEEASRRKSMQAKQRQWEEEERRRMVEREREERRMYEQQKAFEEQERLSEIRRYED
SLRKEREEEERQRAKKKKKQFQPKPEIRNDYLDDFPPRKTDKRILDRERPSKRRLDPELG
GRHGLEYTPSTKRRRTGEVGLSNVLEGIIETLKGRKEVSFLFLKPVTKKEAPDYHKYVKR
PMDLSTIREKARKLEYKNRDQFRHDMAQIAINAHLYNDNRNPGIPPLADQLLEICDFLLM
EHDASLSEAEATMGT
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgaatctggtagcgcatcccacgatggtcgtgatgaagatgatgatgatgaa
tatgaggaggctggtggtggcaaccatcttttgggatttatgtttggaaatgttgactac
tctggggatcttgatgttgattaccttgatgaggatgcaaaggagcatcttgctgcattg
gctgacaagcttggtccatccctaacagatattgatttgtctgtgaaatcgccacaaaca
cattcagatgctgctgaacaagattatgatgacaaggcggaggatgctgtggactatgag
gatattgatgagcaatatgaaggccctgaagttcaaactgccaccgaggaggacttttta
ttgccaaagaaggattatttctctaaagaaattgcagtaactactttgaacaacacagcc
tctgtttttgatgatgaaaactatgatgaggatgatactgaagagaacaaagagcaggat
gtgttgaagaacagcactgaaggccaaccttttcctgaaacaggcaagtacaatcatgat
ttcaaagaagcatgtgaaggggaaaaacttgctaaagatgttataccctcatattctgaa
gagcttgcaaaagatgccctgcccctggattctcctgaatctgtggattttgccgacttt
caggaggagtctgttgagccatttgatggtaaaagctctatgccactaccaattctttgc
atagaagatggattacctatcctacggttttctgaaatttttggcattcatgaaacccga
aagaagattgagaagagggaccaccgttattctgttgcaaaagagaagtacaacttggat
agttctgaacttcttgaagatgatgaagaggaaattttgagaggatcttataaagacttt
ccttggttgaaggtggcatgtgtaactgaagacaacatttcagatgatgaactgggatcc
tttcaggggaaaggaagaataggtgcaactgctgatgacaggaaaaaagacttttgtagt
agtgctgaaccaatgaagtcaaatatgccacaaaatctctctgctgattggagttcacct
tcttgtcccaagttctatcctcttgaccaacaggattgggaggatggaattatttggggc
aactctccagcttcaagtgctgagactgctgagagttttgagacctctggaccgaatttt
ggagcatcttttgataaagaaatggatctggaggctgactcaggaacttcggaactagga
attgaatccaacgaaaaagataaaaattcctttatccacgttcaatctgtttctgtggaa
ccttttggctcacgagaaatttcgggacaaacggacgttcctttattagcaggaagattt
catcctcaacttttgaggttagagtctcgattggatgtaaatcagcaagataacactgag
gatggggaatatattgcccaagaaaaaacctgctctgatgccttgaggcgtttcagtgag
ctcacattgctgaataaagatgtggaggaaggatcttggttggacaacattatttgggaa
ccagaacaagccatagcaaaaccaaaactaatttatgatcttcaagacaaacagatgctt
tttgaaattctggacagtaaggatagcaccagtcttcagcttcatgctggtgcaatgatc
actaccggtttggggaagcccaatgtgggtgattctgctgagttacttcatggaggtcct
acagggcgtttcaatattgccaatgacaaattttattcaaacagaaaatcttcacagcaa
tcaaaatcacattcaaagaagcgcactgctcatgttctcaaagttctgcattcaattcca
gctcttaaactagagactatgaaggcaaagctaagcaataaagatcttgctaattttcat
cggcctaaagctctatggtatccccatgataatgaagtggtgctcaagggacaatggaag
ctgcctacacaaggacccatgaaagtcatattgaagagtttgggaggcaaaggaagtaaa
cttcatgtggattttgaggagactgtctcttcacttaaggcaaaagcgtcaaaaaagtta
gattttaaactctctgagccagtaaaaatattttattcggggagggagcttgaagacgat
agatctcttgctgaacaaaatgttcaaccgaactccttgctgcatcttgttcgctcaaaa
atatatttgttgcctagggcacaaaagcttccgggtgagaacaagtctttgcgtcctcct
ggggcttttaagaagaaatctgatctttctgtgaaagatggccatgttttcctgatggaa
tactgtgaggagaggcctttgctcctaggaaatgttggaatgggtgcaagattatgtacc
tactaccaaaaatcaactccaaatgatcaaacaggtgtattgatgcgcaatgaaaacaac
aatttggggagtgtcctcattcttgatcctgctgataaatcaccttttcttggagacata
aaacctggttgcagccagtcgtcccttgagactaatatgtaccgagcacctatatttcag
cataaagtgtcatcaacagattatctattggtccgcacagcaaagggaaagctgtctatc
aggcgcattgacaggattgatgttgttggacaacaggagcctcacatggaagtgatgtct
cctgggtcaaaaggagtccagacatacattatgaacagactatcggtatacatgtatcgt
aaatttcatgctgatgagaagcgtggtgtgcgcccttttatccacgcagatgagttgtct
gcacaatttcctagcttgtcagagaccttccttaggaaaaggcttagaaattgtgctgat
atgcagagaggatcaaatgggcagctgatttgggttacgaagagcagctttcgcattcca
tcagaagaggaattacggaggatggtgacgcctgaaaatgtctgtgcatatgaaagcatg
caggctggcctttacaggctcaagcgcctaggtattacccggctaactcaacctacaggc
ctttcctctgcaatgaatcagcttccagatgaagcaattgccttagctgctgcttcacat
attgagagggaactgcagataacaccatggaacttgagtagcaactttgttgcctgtaca
aaccaggacagaggtaatattgagcgtttggaaattaccggggttggagatccttctgga
cgaggattaggtttcagttatgtccgcactactccaaaggcacctgtatcaaatgcggtg
acaaagaaaaaagcagctcttgctaaagggacaactgttactggaacggatgctgatctt
cgcagactgagcatggaagctgcacgtgaggtcctccttaagttcaatgttccagaggac
cagattgctaaacagacaaggtggcacagaattgccatgattcggaaactgtcaagcgag
caagccgcttcgggtgtaaaggttgatgcaacaacaataagcaagtatgctcgaggtcag
cgtatgtcgtttttgcaattgcagcagcagacgagagaaaaatgtcaggagatctgggat
cggcaggtccaaaatctttctgcggttgatggtgaagaaattgagagcgatgcagaagta
aatagtgacctagattcctttgctggagacctcgaaaatcttcttgacgcagaggaatgt
gaagagggcgatgagggtgcttgtgatttaaagcatgacaaaatagatggtgtcaaggga
ctcaagatgagaaggcgcccatttcaagctcagttggaagaggaaatcgaagacgaggct
gctgaagctgcagaactgtgcaggatgctcttggatgatgaggaagccgaacgaaagaag
aagaaaaaggaaaaatctgtgggggagcgagttggggctccagaggcacaatcgcggttt
gttatggaaaataccgaacgtggaaagaaaaccagtgtgactactaaagcagtcatcaaa
cctgatgtgttgaatgcatttaaggaggatatagctggggatcagagtgaggctgatggt
ttagttgcgaaaaggagcttttctagcaaggtaaaaccaaagaaaggtaaaatcgtcgat
gttgcggagccgggattactcaaaaagaaagttaaaatactggctgatggaattcagaat
gtcaaggagaaaaaatcggcacgagagagttttgtctgtggagcttgtggtcagcttggc
catatgagaacgaacaagcattgtccgaagtacggggaagatttggtggaaccacgaccc
gaaaatgcagatcccgagaaggcgtcagcaaaacctacctcgtcggagcatgcagatccg
ccccagccgaagcccccgatgaagaagatcgtacagagaagcgcaacgaagatagcggtg
gtcgagactcaggacgatgaaaagtctagctcgaaggctaaagttctgaagttcaaatgc
ggttcgaccgacaaattgcccgataaacccacccccgccacctcgctgagttccgataaa
ccggcaatgtcagatggcgaaactgggtccaagtccgtcgtgaagctcaataagttgaag
ttttctaacaacatgaaacaacccgtggaagagactgcagtcgagtcacgcaaacccgcc
attctaataaaaccgttagtcgaggctggtgataagccacgcaagaagattgtgatccga
caatcgaaggactcttctaacgctgaggatgtcagccaggaaggtagcagcggtttcgaa
cataggaaaatgaaaaaaatcgtcgaattgtcgtacgctgacatgtatacggatcaggga
agttatcatttctccgaagaggcatcgaggaggaaaagcatgcaggctaagcagaggcaa
tgggaggaggaagaaaggcggagaatggtggagagagagagagaggaaaggaggatgtat
gagcaacagaaggcattcgaagaacaagagagattatcggaaattcgaagatacgaagat
agtttaaggaaagagagagaagaagaagaacgccaaagggcaaaaaagaagaagaaacaa
ttccagccaaaacccgaaatcagaaacgattacttggacgattttcctcctaggaaaacc
gacaaaaggatcctggatcgagagagaccatcaaaacgaagactagatcctgagttgggg
ggaaggcatggcttggagtacacgccatccacaaagcgtcgaagaacgggagaggttggc
ttgtcaaacgtcttggaggggatcatcgagactttgaagggaaggaaggaggtatcgttt
ctcttcttgaaaccagtgaccaagaaagaggctccagactaccacaaatatgtaaagcgc
cccatggatctctccacgatccgggagaaggcaaggaagctggagtacaaaaaccgtgac
cagttcaggcatgacatggcacaaatcgccatcaacgcacacctgtacaacgataatcgc
aatccaggtattcctcccctcgcagatcagcttctggagatctgcgacttcctgttgatg
gaacacgatgcctcattgtcagaagcagaagccactatgggtacttag
DBGET
integrated database retrieval system
