Ipomoea nil (Japanese morning glory): 109169018 Help Entry 109169018         CDS       T04663                                  Name (RefSeq) protein CTR9 homolog   KO K15176   RNA polymerase-associated protein CTR9 Organism ini  Ipomoea nil (Japanese morning glory) Brite KEGG Orthology (KO) [BR:ini00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ini03021]     109169018 Transcription machinery [BR:ini03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     PAF1 complex      109169018 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_1 TPR_2 TPR_19 TPR_8 TPR_16 TPR_14 TPR_12 TPR_17 TPR_11 TPR_CcmH_CycH TPR_6 TPR_7 TPR_9 ANAPC3 TPR_10 ARM_TT21_C ARM_TT21_5th TPR_Slam Fis1_TPR_C Coatomer_E NatA_aux_su Motif Other DBs NCBI-GeneID:  109169018 NCBI-ProteinID:  XP_019173457 LinkDB All DBs Position Un AA seq 1091 aa AA seqDB search MACVYIPVQNSEEEVLVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR QILEEGSSPDIDEYYADVRYDRIAILNALGAYYSYLGKIETKHREKEDHFIMATQYYNKA SRIDMHEPSTWVGKGQLLLAKGDLEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD SLELYKRALQVYPQCPAAVRLGIGLCRYKLGQLVKAKQAFQRVLELDPENVEALVALAIL DLQTNEAGGIRGGMEKMQKAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTNH GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKEINKPQEFVLPYYGLGQVQLKLGDLRS SLSNFEKVLEVYPENCETLKSLAHIYVQLGQPEKALEYLRKATKVDPRDPQAFLDLGELL ISTDAGAALDAFKTARNLLKRANEEVPIELLNNIGVLHFERGEFELAGQTFRDALGDGIW SKFLDAKLQSDANGKAPNDEVLQHSNGEGPCELFKTVQYPMDASASIRQYKDFQLFRRLE EQGIAVELPWNKVSPLFNQARLLEQLYDTETASIFYRLILFKYPDYVDAYLRLAAIAKAR NNVQLSIELIGDALKVDDKCPNALLMLGDLEIKNDDWVKAKETFRAGKEVIDGNESYATL CLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTKVLFQHNSNLYAANGAGVILAEKGQFD ISKDLFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYHNTDSQV LLYLARTHYEAEQWQDCKKTLLRAIHLSPSNYTLRFDAGVALQKFSASTLQKTKRTVDEV RSTVAELKNAVRLFSMLSTASNLHMHGFDEKKIETHVEYCKHLLEAAKVHCEAAEREDQQ IKQRLELARQVILAEENQRKAEEQKKYQMERRKQEDELKQVMQQEEHLLRKKEQWKSSTS ASKRKDRPHAEDEEGGNGDRRRRKGGKRRKRDKKSRFDSEEADMDDQEEIDEDGNMNYRD HDHDDQAENNPQDLLAAAGLEDSDAENDGPEPPSNVNRRRHAWSSDEEDDPLQRQGSDRG GDGEKPNDADE NT seq 3276 nt NT seq  +upstreamnt  +downstreamnt atggcctgtgtatatattccggtgcagaactcggaggaggaggtactagtcgccctggac cagcttccaagagacgcttctgatatactcgacattcttaaagccgagcaagctcctctt gatctctggctaattatcgctagggagtatttcaaacaaggcaaaattgaacagtttcgg caaatattggaggagggatctagtccagacattgatgaatattatgcggatgtgaggtat gatagaattgctattctaaatgcattgggggcatattatagctatcttgggaagatcgag acaaaacatagagagaaggaggatcactttataatggcaactcagtactataataaggcg tcaaggattgacatgcacgagccttctacctgggttgggaaaggtcagcttttactggcc aaaggagatctagaacaggcatttgctgccttcaagattgtactggatggagatcgagat aatgtgcctgctcttcttggtcaggcatgtgttcagtttagccggggacgatattctgat tcattggagttatataagagggccttgcaagtgtaccctcaatgtcctgctgctgtaaga cttggaattggtctttgccgatataaattgggtcaacttgtgaaggcaaagcaagcattt cagcgtgtcttggagttagatccagaaaatgtggaagctcttgttgcacttgctattctg gatttgcaaactaatgaagctggtggcattaggggaggaatggaaaagatgcaaaaagct ttcgagatatatccttattgcgcaatgtcactaaactacttagccaatcattttttcttt actggtcaacattttctggttgagcaacttactgaaactgcacttgctgttactaatcat gggccgactaagtcacattcttactacaatttggcgcgctcatatcatagcaagggagac tatgaaaaagctggaatgtactatatggcatctgtaaaagaaatcaataagccacaagaa tttgtattgccctattacgggctgggacaagttcaactgaaattgggagatcttaggagt tcactgtcaaattttgaaaaggtcttggaggtttatcctgagaattgtgagacactaaaa tctcttgcccacatttatgtgcaacttgggcaaccagagaaggctttggagtatttgagg aaagccaccaaagttgatcctcgtgaccctcaggcatttctggatcttggtgaactttta atttcaacggatgcaggtgctgctttagatgcctttaaaacagcacgtaatttattgaaa agggcaaatgaagaagtacctattgagctgctgaataacattggagtccttcattttgaa aggggagaatttgagcttgctggacaaactttcagggatgctttaggtgatggcatatgg tctaagttccttgatgcaaaactgcaatctgatgctaatgggaaagctccaaatgatgaa gtacttcagcattccaatggtgaaggaccatgtgaacttttcaaaactgtgcaatatcca atggatgccagtgcatccatccgtcaatacaaagacttccaattgtttaggagacttgag gaacagggtattgctgtagaacttccttggaataaagtttccccactgtttaaccaggca agattgctggaacagttatatgacacagaaactgccagtatcttttaccgcctgatcttg tttaagtatccagactatgtagatgcttatttgagacttgctgcaatagccaaagcgcgg aataatgttcagctgagcattgagctgattggtgatgctctcaaagtggatgataagtgc ccaaatgcattattaatgcttggggacctggaaattaagaatgatgattgggtcaaggca aaagaaacattccgagcaggcaaggaagtgattgatggaaatgaatcttatgctactctt tgtctgggaaattggaactacttcgctgcaattcgcaatgagaaaagaaatcctaaattg gaagctacacatctggagaaggctaaggagctctatacaaaagttctctttcagcataac tctaatctatatgcagcaaatggtgctggtgttattttggcagaaaaaggtcaatttgat atttcaaaggatcttttcacccaggttcaagaagctgcaagcggaaatgtttttgtccaa atgccagatgtatggattaatcttgcacatgttcactttgcccaaggaaattttgcactt gcagtgaaaatgtatcaaaattgcttgcggaaattctatcacaataccgacagccaggtg cttctctatttagccagaacacattatgaagctgagcagtggcaggactgcaaaaagact ctgttaagagccatccacttgtcaccttcaaattacacattaagatttgatgcgggtgta gcattgcaaaagttctctgcctcaaccttacagaagacaaagaggactgttgatgaggtg aggtcaacagttgcagagcttaagaatgcagttcgtttattcagcatgttatctactgct tctaatcttcacatgcatggatttgatgagaaaaagattgaaactcatgttgaatactgc aagcacttactcgaggcagccaaagtccattgtgaggcagctgagcgtgaagaccaacaa attaagcagagactggagcttgctcgtcaggttatattggctgaggaaaatcaaagaaaa gctgaggaacagaaaaaatatcaaatggagagacggaaacaggaggatgaacttaagcaa gtgatgcaacaagaagaacatctgttgcgcaaaaaggaacaatggaaaagtagcacttct gcctctaagcgaaaggatagaccacatgctgaggatgaagaggggggcaatggtgatcgg aggaggagaaagggtgggaaacgcagaaagagggacaaaaaatcacgctttgattctgaa gaagcagatatggatgatcaagaagaaatagatgaagatggcaatatgaattacagggat catgatcacgatgatcaagcagagaacaatccacaggatcttcttgcagcagctgggctt gaagattctgatgctgagaatgatgggcctgaacctccatcaaatgtgaatcgacggagg catgcctggtcttcagatgaggaagatgatccgttgcagaggcagggtagtgacagagga ggtgatggtgaaaagccaaacgatgctgatgagtaa

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