Ipomoea nil (Japanese morning glory): 109169286
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Entry
109169286 CDS
T04663
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109169286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109169286
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109169286
Complex C
U4/U6.U5 tri-SnRNP related factors
109169286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
109169286
NCBI-ProteinID:
XP_019173705
LinkDB
All DBs
Position
Un
AA seq
385 aa
AA seq
DB search
MANRTDPTAKSIHGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDIYRYL
EPLYNDYRKLRLKSSEGKFTLTHVDEYIDELLTSDYSCDIALPRVKKRWTLESLGQLEPR
RSALEDDFEEEEEKDEDEQLTTGLDDGHDKDYHHGHSPTRERDRDRRRDRDSHRYRDRDY
DRDRDYDREYDRDRDYDRERGRGRDRDRDRDRDRDRDRERHRLREDKDYGRDRDRERDRE
GRERDRRDRGRRRSHSRSRSRDRKDRDDERRKRHARSSASPTRDEPKKKKKAEKKEMRED
GTDHPDPEIAEANRLRASLGLKPLK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgtacggacccaacggcgaagagcatacacggaaccaatccgcagaacctt
gtggagaaaatagtgcggtcgaagatttaccagaacacttactggaaggagcagtgcttc
gggctgacggcggagacgctggtcgacaaggctatggagctggatcaccttggcggaacc
ttcggcggaaaccgcaagcccacgcctttcatgtgcctcgtcatgaagatgctccagatc
cagcccgagaaggacatcgtcgtcgaatttatcaagaatgaggattacaagtacgtccgt
gtcctcggcgccttttacttgcgtcttaccggaacggatatcgacatttatcgctacctt
gagcctctgtacaatgattatcgcaagttgaggctcaaatcatctgaaggaaagtttact
ttaactcatgtggacgagtatattgacgagctgctaacaagtgattactcttgtgatatt
gccctgcctagagttaagaaaagatggacccttgaatctcttggtcaattggaaccccga
agaagtgctttggaagatgactttgaagaggaggaggagaaggatgaggatgagcagtta
actactggattagatgatgggcatgataaggattatcatcatggtcacagtccaacaagg
gaaagagatagggacaggaggcgagatagagatagtcacagatacagggatcgtgattat
gacagagaccgagattatgatagagagtatgacagggatcgtgactatgatagggagcgg
ggaagaggacgtgacagggacagggatagagacagagatagagatagggacagggaacgc
catcggttgagggaagacaaggactatggccgtgatagggatcgagaaagggacagagaa
ggcagggaacgggatagacgtgatcggggtcgcagaaggagccactctagaagcagaagc
agagaccgcaaggatcgtgatgatgagcggcgtaagagacatgctcgcagcagtgctagt
cccactagggatgaacccaagaaaaagaagaaagctgagaagaaggagatgagagaggat
ggaaccgatcatccagacccagagattgccgaagcaaatagactgagggcatcccttggg
ttgaaacctttgaagtag
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integrated database retrieval system