KEGG   Ipomoea nil (Japanese morning glory): 109169286
Entry
109169286         CDS       T04663                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109169286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109169286
Spliceosome [BR:ini03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    109169286
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    109169286
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 109169286
NCBI-ProteinID: XP_019173705
LinkDB
Position
Un
AA seq 385 aa
MANRTDPTAKSIHGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDIYRYL
EPLYNDYRKLRLKSSEGKFTLTHVDEYIDELLTSDYSCDIALPRVKKRWTLESLGQLEPR
RSALEDDFEEEEEKDEDEQLTTGLDDGHDKDYHHGHSPTRERDRDRRRDRDSHRYRDRDY
DRDRDYDREYDRDRDYDRERGRGRDRDRDRDRDRDRDRERHRLREDKDYGRDRDRERDRE
GRERDRRDRGRRRSHSRSRSRDRKDRDDERRKRHARSSASPTRDEPKKKKKAEKKEMRED
GTDHPDPEIAEANRLRASLGLKPLK
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggctaaccgtacggacccaacggcgaagagcatacacggaaccaatccgcagaacctt
gtggagaaaatagtgcggtcgaagatttaccagaacacttactggaaggagcagtgcttc
gggctgacggcggagacgctggtcgacaaggctatggagctggatcaccttggcggaacc
ttcggcggaaaccgcaagcccacgcctttcatgtgcctcgtcatgaagatgctccagatc
cagcccgagaaggacatcgtcgtcgaatttatcaagaatgaggattacaagtacgtccgt
gtcctcggcgccttttacttgcgtcttaccggaacggatatcgacatttatcgctacctt
gagcctctgtacaatgattatcgcaagttgaggctcaaatcatctgaaggaaagtttact
ttaactcatgtggacgagtatattgacgagctgctaacaagtgattactcttgtgatatt
gccctgcctagagttaagaaaagatggacccttgaatctcttggtcaattggaaccccga
agaagtgctttggaagatgactttgaagaggaggaggagaaggatgaggatgagcagtta
actactggattagatgatgggcatgataaggattatcatcatggtcacagtccaacaagg
gaaagagatagggacaggaggcgagatagagatagtcacagatacagggatcgtgattat
gacagagaccgagattatgatagagagtatgacagggatcgtgactatgatagggagcgg
ggaagaggacgtgacagggacagggatagagacagagatagagatagggacagggaacgc
catcggttgagggaagacaaggactatggccgtgatagggatcgagaaagggacagagaa
ggcagggaacgggatagacgtgatcggggtcgcagaaggagccactctagaagcagaagc
agagaccgcaaggatcgtgatgatgagcggcgtaagagacatgctcgcagcagtgctagt
cccactagggatgaacccaagaaaaagaagaaagctgagaagaaggagatgagagaggat
ggaaccgatcatccagacccagagattgccgaagcaaatagactgagggcatcccttggg
ttgaaacctttgaagtag

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