Ipomoea nil (Japanese morning glory): 109170104
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Entry
109170104 CDS
T04663
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109170104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109170104
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
SR proteins
109170104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109170104
NCBI-ProteinID:
XP_019174608
LinkDB
All DBs
Position
Un
AA seq
274 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGKLVDGREIMVQFAKYGPNAEKIQKGRIIESVTKTRGRSRSH
SPRSRYRDDHRDRDYRKRSRSRSRGRSEHDRYRGRDRDRHRYRSRSGSPDYHKDRGRGRY
DDERRSRSRSYGSASPARRSPSPTRSPSPRRTPQPRDGSPSPRRSPSPRRTPQSRDGSPD
GRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttggaagatctggtcctccagacattagagacacctactctcttctagtt
ctcaacatcacttttcgtaccaccgctgatgacttgtatcctctcttcgataagtatgga
aaagttgttgatgtcttcatcccgagagatcgaaggactggagactctaggggatttgca
tttgttaggtacaagtatcaggatgaggctcagaaggcagttgagaagcttgatggaaaa
cttgttgacggaagagaaataatggtacaatttgcaaaatatggaccaaatgctgaaaaa
attcaaaagggaagaataattgagtctgtgaccaagacaaggggaaggtcaaggagccac
agtcctagatcaaggtatagagatgatcatagagatagagattatagaaagaggagcagg
agtagaagtcggggtagatctgagcatgatcgataccgtggcagggatagagatcgtcat
cggtacagaagccgcagtggaagccctgattaccataaagatcgtggtagaggtagatat
gatgatgagaggcgtagccgaagtcgttcctatggaagtgcctctcctgctcggcgtagc
ccaagtccaacgaggagtccatctcctcgcagaacccctcaacctagggatggtagccca
agtccaaggaggagtccatctcctcgcagaacccctcaatctagggatggcagtccagat
ggacgcaatgacaaagtacgctctccaactccaagaagtttgtcaccccgtggccggggg
gctgagtctcgaagcccgtctccacgttctgatgctgatgagtga
DBGET
integrated database retrieval system
