Ipomoea nil (Japanese morning glory): 109170228
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Entry
109170228 CDS
T04663
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109170228
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109170228
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109170228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
zf-RING_4
Prok-RING_4
zf-RING_10
zf-Nse
Sina_RING
Zn_ribbon_19
zf_C2H2_ZNF598
zf-RING_6
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109170228
NCBI-ProteinID:
XP_019174787
LinkDB
All DBs
Position
Un
AA seq
252 aa
AA seq
DB search
MLSTKKMRSFSSSSSPPPGKKLPFLPSSCSTLLIKYKPNISVLSIAIAKSLCHSENPSNP
VSKMVLDIDLNGPPRVDDLLVRDDAIGVNTHLELGLPQLQVTANSDSIDDEVVICSPRSF
AEAREKSRRNHQVIEVLDDETEAQGGPPDGFIFCRRRKVSRRNGANVSCINLETPEKYKE
RKGDKPEPKPKPPTFSCPVCMGQFVEETSTKCGHIFCKKCISTAIASQGKCPTCRQILKG
KDTFRVYLPILD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtaccaaaaaaatgcgaagtttttcgtcatcttcttctccccctcccggaaag
aaattgccctttttgccatcatcatgctcaaccttacttataaagtacaaaccgaacatc
tccgtcctctctatcgccatcgctaaaagcctctgccactcagaaaatcccagcaaccca
gtttcaaaaatggttctagatatagatcttaatggtccacctagagttgatgatctttta
gtaagggatgatgctattggtgtgaatacacatttagagcttggactgcctcaattacaa
gtgacagcgaattccgattctatagatgatgaagttgtgatatgctccccaagaagtttt
gctgaggctagggaaaagtcaaggaggaaccatcaggtaatagaagtgctagatgatgaa
actgaagcacaaggaggccccccagatgggtttatcttttgcagacgaaggaaagtttca
agaaggaatggtgcaaatgtttcgtgtataaacttggaaactccagaaaagtacaaggag
agaaagggtgataagcctgaaccaaaaccaaaaccaccgacctttagctgtccagtttgt
atgggacagtttgtggaggagacgtcaaccaagtgtgggcacatattctgtaaaaaatgc
atctcgactgcaatagcatcccaagggaaatgccccacctgtcgacagatactcaaagga
aaagacacattcagggtctaccttccgatattagattaa
DBGET
integrated database retrieval system
