Ipomoea nil (Japanese morning glory): 109170466
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Entry
109170466 CDS
T04663
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109170466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109170466
Membrane trafficking [BR:
ini04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109170466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
109170466
NCBI-ProteinID:
XP_019175131
LinkDB
All DBs
Position
Un
AA seq
790 aa
AA seq
DB search
MIAAGIEDEDKWLAEGIAGIQHNAFYLHQAMDANNLREALKFSAQLLSELRTSRLSPHKY
YELYMRAFDELRRLELFFRDEDRHGCPVVDLYELVQHAGNVLPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRSVQHPIRGLFLRSYLAQISRDKLPDIGSEYEGEADTVMDAVDFVL
QNFTEMNKLWVRMQHQGPARTEEKLEKERSELRDLVGKNLHVLSQIEGVDLEIYKETVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLEILLGACPQLQPTVDIKTVLSRLMD
RLSNYAASSPEILPDFLQVEAFAKLSSAIWKVIEAQVDMPIVGAVSLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGNPKLEDSKATKQIVALLSAPLEKYSDIVTALTLSNYPRVMD
HLDAGTNKIMAKIIIENIMKRDTCVSTADKVEVLFELIKGLIKDLDESTTDEFDEEDFKE
EQNSVARLIHMLYNDDSEEMLKIIYTVRKHILAGGPMRLAFTVPPLVCSALKLIRRLQGQ
DGDVAGEKIPATPKNIFQLLSQTIEVLSAVPSSEMALRLYLQCAEAANDCDLEPVSYDFF
TQAFVLYEEEVADSKAQVTAIHLIIGTLQRMSVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPQITTAAIQGLIELIKTEMQSDSTTADPDSDAFFASTLRYIQFQKQKGGA
MGDKYDPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgccggaatcgaagacgaagataaatggctggcggaaggcatcgcaggcatt
cagcacaacgcattctatttgcatcaagctatggacgcgaataatctaagagaagctctt
aagttctcagctcagcttttgtctgagctgcgaacttcgaggctttcgccgcataaatac
tacgagctctacatgcgagcatttgatgagttgaggaggctggagctgttctttagggac
gaggatcgccatggttgtccagttgttgacctgtatgaacttgtccaacatgctggcaac
gttttacctagactgtacctcctatgtactgttggttcagtttacatcaaatcaaaggag
gctcctgcaaaggatatactcaaagacctagttgaaatgtgtcgttctgttcaacatcct
atacgtggacttttcttgaggagctatcttgctcaaattagcagagataaattaccagat
attggttctgagtatgaaggagaagctgatactgtcatggatgctgtagattttgtgttg
caaaatttcacagaaatgaataagctatgggttagaatgcaacaccagggacctgccagg
actgaagagaagctggaaaaggaaaggagcgagcttcgtgatctcgttgggaagaatttg
catgtccttagtcagatagagggtgttgaccttgaaatatacaaagagactgtgcttcct
cgagtacttgagcaggttgtcaactgtaaagatgagcttgcacaatattatttgatggac
tgcataattcaggtctttcccgacgagtaccatttgcagactcttgaaatactattgggt
gcttgcccccagcttcaacctactgttgacatcaagaccgttttatcacgcttgatggat
agattgtcaaactatgctgcttcaagtccagaaatcttaccagacttccttcaagtagaa
gcatttgccaagttaagcagtgccatttggaaggtaatagaagcacaagttgacatgcct
attgttggagctgtttcgttatatgtctcccttctgacttttacacttcgtgtacatcct
gatcggcttgattatgtggatcaagtactgggagcttgtgttaagaaactctctggcaat
ccaaagcttgaagatagtaaagcaacaaaacaaattgttgctctcctcagtgctccacta
gagaaatatagtgatattgtcacagctctaacactctccaactatccacgagttatggat
caccttgatgctggaacaaataaaattatggcaaaaattataattgaaaacattatgaaa
agggatacctgtgtttctactgctgacaaggttgaggttttgtttgaattgataaagggg
ctcatcaaagatttggatgaaagtactacagatgagtttgatgaggaagatttcaaggag
gaacaaaattctgttgctagactaatacacatgctgtataatgatgattcagaagagatg
ctaaagataatatacacagtgagaaagcatattttggctggaggtccaatgcgcctagcc
tttacagttcctccattagtttgttctgctctgaagttgattagaagattgcaaggtcag
gatggagatgttgctggagaaaagattcctgccacacccaagaacatttttcagttgttg
agtcagactattgaggttctctcagcagttccatcatcagaaatggcattgaggttgtac
ttgcaatgtgcagaggctgccaatgactgtgatcttgaacccgtctcttatgactttttc
acacaagcatttgtactatatgaggaagaagttgcggattctaaagcacaagtgactgct
attcacttgataattggaactcttcagaggatgagtgtatttggtgttgagaacagggat
accttaactcataaagctactgggtattcagcaaaacttctgaagaaacctgatcaatgc
agagcagtttatgcttgttcacatctcttttgggttgatgaccaagatggtatcaaggat
ggtgaaagggttttgctgtgtttaaagcgttctttgagaattgcaaatgctgctcagcag
atggcaaatgttacaaggggtagcagtggacccgtcacactatttgttgaaatacttaac
aagtacctctatttttttgagaaaggaaatcctcaaataaccactgctgcaattcaaggc
cttattgagttaattaaaacagagatgcagagtgacagcacaacagctgatccagattca
gatgctttctttgccagcacgttgcgatatattcaatttcaaaaacaaaaaggtggggca
atgggtgacaaatatgatccaatcaaggtatga
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