Ipomoea nil (Japanese morning glory): 109170865
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Entry
109170865 CDS
T04663
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109170865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109170865
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109170865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109170865
NCBI-ProteinID:
XP_019175548
LinkDB
All DBs
Position
Un
AA seq
255 aa
AA seq
DB search
MAGKSGTTPATYSPFPSQRVKKPSTLTGDDWVRPDGRHFYRCRDALLNTGAVKAASGSAY
AEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVTYTTFATPVRGQMSENKELSSMLHKA
LEGAIILDSFPKTTVDVFALVLESGGSDLPVIISCASLALADAGILLYDLVAAVSVSCVG
KNLIIDPISEEESYQDGSLMIACMASRKEVTQLTITGEWSTPKINEAMELCIDACSKLGS
NMRACLKSAVSDSKE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaatcagggaccacaccggcgacgtattctccgtttccatcgcagagggtg
aagaaaccgtccactctcaccggcgacgattgggtgcgccccgacggccgccacttctac
aggtgtcgcgatgcattgctaaacactggtgcagtgaaagcagcatcaggatctgcatat
gcagaatttggaaatactaaggtcattgtttcagtgtttgggccaagggagagtaagaaa
gcaatgatgtacagtgatacaggccggttgaattgtaatgttacttatacaacttttgcc
actcctgttcgtgggcagatgtcagagaataaggagctctcctcaatgctgcataaagct
ttggagggtgccataattctagattcatttccaaagaccactgtagatgtttttgctttg
gttttggaatctggtggcagtgatcttcctgtgattatatcatgtgctagtctagctcta
gcagatgcagggattttgttgtatgatttggtggcagcagtttctgtgtcctgtgtgggg
aagaacctcatcatagaccccatatcagaagaagaaagctaccaagatggcagcttaatg
atagcatgtatggcttcgcgtaaggaggtcacccagttgactatcaccggagagtggtcc
acgccaaagattaatgaagcaatggagctgtgtattgatgcttgttcgaaactggggagt
aacatgagagcttgtttgaaaagtgctgtttccgactccaaggaatag
DBGET
integrated database retrieval system
