Ipomoea nil (Japanese morning glory): 109171291
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Entry
109171291 CDS
T04663
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109171291
Transcription machinery [BR:
ini03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109171291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
109171291
NCBI-ProteinID:
XP_019175901
LinkDB
All DBs
Position
Un
AA seq
553 aa
AA seq
DB search
MGFRLPLKWGLSVQPPFSTKSSSYWLSSNSFKGRETLYNSLRTSPSFINGENDASHSDPL
KVWTCLSDAQHCENDDSLTEVKMGIGRGSQSGLYTRTCNNVDMSVQEDKLPFLESSKAKH
FGFLMQNLEMLEHIFADSDGVRLERDILVQLERIGALELFHTCLERTLKSSTSSNLTDVP
IELVEEIQEDGLVNVNVDKSFVSSGKRQERESRRKRQPKNTRGVKVELLPKRFEDPRQPK
LSSGKKLGNSRNRRQSIAKNEIEMSIGIKVVAELERLRSVLEEETGRVASSSAWAKAAGL
SQKILQQRLHFGWYCRDELLRSTRSLIIYLARNYRGFGVAFDDLIQAGNMGVLEGAVRFD
HTRGYKFSTYAQYWIRRSMSKTVAKHARGIRIPIKLRKSINKIQKARNALSSTRGKFLGE
SEIAEFTGLSTERIALANNRLRVVGSVDQKVGDCISVKFMEFTPDTSAICPEEAVMRESM
VNKMYLLLKDLMPIERQILIFRFGLGNIPRKSLEEIGRLFGVSKEWIRRVESRALTKLRN
QNSLHDFSRYLHI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggggtttaggctgcccctgaaatggggtctctcagttcagccccctttctccaccaag
tcatcatcgtattggctttcttcaaattcattcaagggaagggagactttatacaattca
ttaaggacttctccatcttttatcaatggggagaatgatgcttcgcatagtgatcctctc
aaggtgtggacttgcttatctgatgcacaacactgtgaaaatgacgactctttaaccgaa
gtgaagatgggaattggcagagggtctcaaagtggattatacaccaggacctgcaacaat
gttgatatgtcagtgcaggaggataagttgccattccttgaatcatccaaagcaaaacat
tttggttttctgatgcaaaatcttgagatgctggagcatatttttgctgactcagatggc
gttagactggaaagagatattcttgtgcaactagaaaggattggagctctagaattattc
catacctgtcttgagaggacactaaaatcttcgacttcctccaatttgaccgatgtgcca
attgagcttgttgaagaaattcaggaggatggtcttgtgaatgttaatgtggataagagt
tttgtttcctctggaaaaagacaagaaagggaatcaaggagaaagagacaacccaagaat
accagaggcgttaaagtagaactactgccaaaaagattcgaagatccaagacagccaaag
ttatcttctggaaaaaaattaggaaattctagaaatagacgtcagagtatcgctaaaaat
gaaatagaaatgtcaattggtattaaggtggttgccgaactggagaggttaagatcagta
ctggaagaagaaactggccgggtagctagctcaagtgcctgggctaaagctgctggtctg
agccaaaagatcttgcagcagcgtttacattttggttggtattgtagggatgaacttcta
agaagtacaaggtccttaatcatatatcttgccagaaactacaggggatttggtgtggca
tttgacgatctaatccaggcagggaatatgggtgtcctagaaggtgctgtaagatttgac
cacacgaggggatacaaattctcaacctatgcccagtattggataaggagatcgatgtcg
aaaactgtagcaaagcatgctagagggattcgaattcctatcaaattacgtaaatcaata
aataaaatacaaaaagctcgaaatgctttgagtagcacccgtggaaaatttctaggtgaa
agtgaaattgcagagttcacaggtctttccacggaaagaattgcattggccaacaaccga
ctgagagttgtgggttcagttgatcagaaagttggagactgtatcagtgtcaaattcatg
gagtttaccccagatacatcagcaatctgtccagaagaagctgtgatgagagagtccatg
gtaaataaaatgtatttacttctcaaagatttgatgcctattgagagacagatattgatc
ttcaggtttggtcttggaaatattccacgcaagtcgcttgaggagattgggaggcttttt
ggtgttagcaaagagtggattagaagagtagaaagtagagcactcacaaaacttagaaat
cagaattctcttcacgattttagccgctatctgcatatatag
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