KEGG   Ipomoea nil (Japanese morning glory): 109171330
Entry
109171330         CDS       T04663                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109171330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109171330
Spliceosome [BR:ini03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109171330
 Complex B
    109171330
 Complex C
   U2 SnRNP specific factors
    109171330
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 109171330
NCBI-ProteinID: XP_019175950
LinkDB
Position
Un
AA seq 805 aa
MLGSLPILPLPAPTEDGNLGPLPLAQLTEKEIDEIKLVSEEDKSKSNSVATHTRTIGIIY
PPPDIRSIVDKTSQFVVKNGPEFEKRIIQSNAGNAKFNFLNASDPYHAYYQHRLSEGRAQ
NQDSAQQQPSQPPDSDAPESTPAVPAADAVDATAKSDPSAQFRTVRKVLEPPEAEQYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLTDKLRKSATDMTTVLERCLNRLEWERSQEQARQKAEDEIEQERVQMAMI
DWHDFVVVETIDFADDEDHDLPPPMTLEEVIRRSKMSGVEEEEFVEPGKEVEMEMDEEEV
QLVEEGMRAATLEENAVQNSEVKAITEDQEPPMRIVKNWKRPEERIPAERDPTKYVVSPI
TGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIF
GTTEEEVSNAVKAEIEKKMEEPKQVIWDGHTGSIGRTASQAMSQNNAEDQYDFANDARNL
PGPQAPPPPRPGVPSVRPLPPPPGLALNIPRPPNSFPYPTPGNPGVMPPPLPRPPMVNTV
PQVQPPPPNIPPMPGQHLMVNRPAMHPSMSMNAPNISLPPPPGSQFTPLGAPRAFVPHPM
SQPGMTIVPPPPMPHGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEDQFLAKHSGPAC
ISIAVPNVDEGNLKGQVLEITVQSLSETVGSLKEKISGEIQLPANKQKLSGKAGFLKDNL
SLAYYNVAPGETLNLSLRERGGRKR
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgttgggttccttgcccatattgccgctccctgccccaacagaggatgggaatcttggt
ccattgcctcttgctcagttgacagaaaaagagatagatgagattaagttggtgagtgag
gaggacaagagcaaaagtaattcagttgcaacccatacaagaacaattgggattatttat
ccacctcctgatatcagaagcattgttgacaagacatctcaatttgtggtgaagaatggt
ccagaatttgagaaaaggattattcagagcaatgcaggcaatgcaaagttcaattttttg
aatgcctcagatccttatcatgcatattatcagcatcgtttgtctgaaggtcgtgcacag
aatcaggattctgctcaacagcaaccttcacagccaccagattcagatgctccagaatca
acccctgctgtacctgctgctgatgctgttgatgcaacagcaaagtctgatccttctgca
cagtttaggactgtacgcaaggttcttgagccaccagaagcagagcagtatactgttcgg
cttcctgaagggatcacaggggaggaattggatatcattaagcttactgctcagtttgtg
gcaaggaatgggaagtcttttctgacagggttgaccagtagggagatcaataatcctcaa
tttcattttttgaagcctactcatagcatgtttatgtttttcacttcactggcagatgcc
tattcaaaagtcctaatgcctcctaaaggcttgactgataaactgaggaagagtgctact
gacatgactactgttctggagcggtgcctgaatcggttggagtgggaaaggtcacaggaa
caggctaggcagaaagctgaggatgaaatagaacaagagagagtgcagatggctatgatt
gattggcatgattttgttgtggttgagacgatagactttgctgatgatgaggatcatgat
ttacctcctcctatgacccttgaggaggttattaggaggagcaagatgtctggtgtggag
gaagaagagtttgttgagccagggaaggaggtagaaatggagatggatgaagaagaggtc
cagcttgttgaagaaggtatgagagctgctacccttgaggagaatgctgttcagaattct
gaagttaaggcaattaccgaggaccaggagccaccaatgagaattgttaagaattggaaa
aggcctgaagaaaggatccctgcagaaagagacccaacaaagtatgttgtctctcctata
actggtgagctgattccgattagtgagatgtccgaacatatgaggatctctcttattgat
cccaagtacaaggagcagaaagagagaatgtttgcgaagattagggagacaacccttgct
caggatgatgaaatttctagaaacattgttgggcttgctaggacacgtcctgatattttt
ggtaccacagaagaagaagtttcaaatgcagtcaaggctgagattgagaagaaaatggaa
gagcccaaacaagtcatatgggatggccacacaggtagcattggtcgcactgctagccag
gcaatgtcccaaaacaatgcagaagatcagtatgattttgcaaatgatgcaaggaacctt
cctggccctcaagctccaccccctcccaggcctggtgtgccatcagttcgaccacttcct
ccaccacctggtttggcactaaatattcctcgtcctcctaatagtttcccttatccaacc
cctggtaatcctggcgttatgcctccacctcttcccaggcctcctatggttaacacggtg
cctcaggtgcaacctccacctcctaacatcccacctatgcctgggcaacatcttatggta
aaccgtcctgcaatgcacccgtcaatgtccatgaatgctcctaacatttctttaccacca
ccacctgggtctcagtttacacctctgggtgctcctcgagcctttgttccccatcccatg
tcccagcctgggatgactattgttccaccacctccaatgccccatggaatgcctccacca
cctccacctgaggaagctccaccacttccagaggaaccagagcctaaaaggcaaaagctt
gatgagtctgttctcattcctgaagaccagttcctggctaagcattcaggacctgcctgt
atcagcattgctgtgccaaatgttgatgaaggaaatctcaaagggcaagtattggagatc
acagtgcaatccttgtctgaaactgttggcagtttgaaagagaagatttctggtgagatc
cagctgcctgctaacaaacagaagctgagtggaaaggctgggtttctcaaggacaattta
tcacttgcatattacaatgttgcacctggagaaacactcaatctttcacttagagaacgt
ggtggcagaaagagatga

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