Ipomoea nil (Japanese morning glory): 109171551
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Entry
109171551 CDS
T04663
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109171551
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109171551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109171551
NCBI-ProteinID:
XP_019176136
LinkDB
All DBs
Position
Un
AA seq
411 aa
AA seq
DB search
MAMPPLYYFLFLLPLLLLLYPTFTAASSPFPDPEVIVQEVNEKINNATISARRKLGFLSC
GTGNPIDDCWRCDPNWDKNRQRLADCAIGFGKHAIGGRDGKIYVVTDPGDHPVNPKPGTL
RYGAIQDEPLWIVFARDMVIKLKEELMLNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
GLNIHDCKQGGNAYVRDSPDHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIH
ASTAITISNNYMTHHNKVMLLGHSDTLTADKNMQVTIAFNHFGEGLIQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSADPTINSQGNRFLAPNDRFNKEVTKHEDAAESEWKKWNWRSEGD
LMLNGAFFTRSGAGASSSYAKASSLSARPSSLISSLTGNAGSLTCKKAKRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccgccactttattactttcttttcctcctccctcttcttcttcttctctat
cccaccttcacagccgcctcttctccattcccagatcctgaagtcatagttcaagaagtg
aatgagaaaatcaataatgccacaataagtgcaaggaggaagctggggttcctgtcatgt
ggcacagggaacccaattgatgattgctggaggtgtgacccaaactgggacaaaaaccgg
cagcgcctagcggattgcgcgatcgggtttggaaaacacgccattggcggaagggacggc
aagatttacgtggtgacagacccaggggatcacccggtgaacccaaagccagggacactg
aggtacggggcgatacaggacgagccattatggatcgttttcgcccgggacatggtgata
aagctgaaggaagaactaatgctcaactcattcaagaccatagatggaaggggggcaagt
gtacacatagcaggaggcccctgcatcacaatccaatatgtgacaaacatcatcatccat
gggctaaacatccatgattgcaagcaaggagggaatgcgtatgtgagggactccccagat
cattatggatggaggacattatcggatggggatggggtgtccatatttggagggagccat
gtgtgggttgaccattgctccctctcaaactgcagggatgggttgattgatgccatacat
gcatccactgccataaccatctccaacaactacatgactcatcacaacaaggtcatgctc
ttgggccatagtgatacccttacagcagacaagaatatgcaagtcaccatagccttcaac
cattttggagaagggctgattcagagaatgccaagatgcagacatggatatttccatgtg
gtgaacaatgactacacccactgggaaatgtatgcaattggtgggagtgctgaccctaca
atcaatagccaaggcaatagattcctcgctccaaacgacagattcaacaaagaggttaca
aaacatgaggatgcagcagagagtgaatggaagaaatggaactggagatcagaaggggat
ctgatgctgaatggagctttctttacaaggtcaggtgcaggggcttcatctagctatgca
aaagcatcaagcttgagtgctaggccttcttctctcatcagttccctcacagggaatgca
ggttcacttacctgcaaaaaggccaaaagatgttaa
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