Ipomoea nil (Japanese morning glory): 109172010
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Entry
109172010 CDS
T04663
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109172010
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109172010
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109172010
NCBI-ProteinID:
XP_019176677
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All DBs
Position
Un
AA seq
406 aa
AA seq
DB search
MALPLYYLLFLLPLLAPTCTFSSPYPDPELIVQEVNEKIANATIARRKLGFLSCGTGNPI
DDCWRCDPNWESNRQRLADCAIGFGKQAIGGRDGKLYVVTDTGDDAVNPKPGTLRYGAIQ
DEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD
CQQGGNANVRDSPEHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLVDAIRGSTAIT
ISNNYMTHHNKVMLLGHSDTYIQDKGMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSADPTINSQGNRFLAPNDRFNKEVTKHEDAPESQWKGWNWRSEGDLMLNGA
FFTTSGSAGASSSYAKASSLSARPSSLVGSLTGGAGALPCKKGKSC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcattgccactttactacctcctcttcctcctccctcttctagctcccacctgcact
ttctcttcaccatatccagaccctgaactcatagtccaagaagtcaatgagaaaatagct
aatgcaacaattgcaaggaggaagttggggttcttgtcatgtggcacaggcaacccaatt
gatgattgctggaggtgtgaccccaactgggaaagcaaccggcagaggctagccgattgc
gcaattgggtttggaaaacaagccattggtggaagggatggcaaactctatgtggtgaca
gacacaggggatgacgctgtgaatcccaagccagggaccttaagatatggagccatacaa
gatgaaccattgtggatcatttttgccagggacatggtgatcaagctcaaggaagaactc
ataatgaactcattcaagaccatagatggaagaggggctagtgtacacattgcaggtgga
ccatgcattactatccagtatgtcacaaatataatcatccatggcttgaacattcatgac
tgccagcaaggagggaatgcaaatgtgagggactcacctgagcattatggatggaggact
ctgtcagacggtgatggagtttcaatttttgggggaagccatgtctgggtagatcattgc
tctctgtcaaactgcagggatgggttggtagacgccatccgtggatcaacagccattaca
atctccaacaactacatgacacaccacaacaaggttatgctcttgggacacagtgacact
tacattcaggacaagggcatgcaagtcaccatagccttcaaccattttggggaaggcctc
attcagagaatgccaaggtgtaggcatggttactttcatgtggtgaataatgactataca
cactgggagatgtatgcaattggaggcagtgctgatcctacaatcaacagccaagggaac
agatttctagctccgaatgataggttcaataaggaagtgacgaaacatgaggatgcacca
gagagtcagtggaagggctggaattggaggtcagaaggagacctgatgctgaatggtgca
ttcttcaccacgtcaggtagtgcaggagcatcatctagctatgcaaaagcctccagcctc
agcgctagaccatcctcgctggttggctctttgactgggggagctggtgcacttccctgc
aaaaaaggcaaaagctgctaa
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