KEGG   Ipomoea nil (Japanese morning glory): 109172140
Entry
109172140         CDS       T04663                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109172140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109172140
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109172140
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     109172140
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 109172140
NCBI-ProteinID: XP_019176831
LinkDB
Position
Un
AA seq 193 aa
MEGVLVTPGEVLGSALEYKAGRGAYLSGQHKIVCASITGFRSFVPPPSDSSDQRLTVEVT
GHKAHGPVPQPGVVVTARVTKVMARMASADIMCVGFQAVREKFTGIIRQQDVRATEIDKV
DMHSSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESVAGATMVPISWTEMQCPQT
GQVEQRKVAKVEA
NT seq 582 nt   +upstreamnt  +downstreamnt
atggaaggggtgttggtgacgccgggagaagtgttgggatcggctttggagtacaaagcg
gggagaggggcttacctttcaggacagcataagattgtgtgcgcctccatcactggattc
cgctccttcgtacctcctccttccgactcttcagaccagagactgactgtggaggttact
ggacataaggctcatggacctgttcctcagccaggtgttgttgttacagccagagttact
aaggtgatggccaggatggcttcagcagatataatgtgtgttggtttccaggctgttcgt
gaaaaattcactggtatcatcaggcaacaggatgttagagcgactgagattgacaaagtt
gatatgcattcatcctttcgcccgggtgacattgttagagctttggtgctatcacttgga
gacgcacgtgcatattatctatcaactgcaaagaatgagctcggtgttgtatctgcagaa
agtgtagctggtgctaccatggttccgataagttggacagagatgcagtgcccccagaca
ggccaagttgaacagagaaaggttgctaaggttgaagcttga

DBGET integrated database retrieval system