Ipomoea nil (Japanese morning glory): 109172140
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Entry
109172140 CDS
T04663
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109172140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109172140
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109172140
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109172140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109172140
NCBI-ProteinID:
XP_019176831
LinkDB
All DBs
Position
Un
AA seq
193 aa
AA seq
DB search
MEGVLVTPGEVLGSALEYKAGRGAYLSGQHKIVCASITGFRSFVPPPSDSSDQRLTVEVT
GHKAHGPVPQPGVVVTARVTKVMARMASADIMCVGFQAVREKFTGIIRQQDVRATEIDKV
DMHSSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESVAGATMVPISWTEMQCPQT
GQVEQRKVAKVEA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggtgttggtgacgccgggagaagtgttgggatcggctttggagtacaaagcg
gggagaggggcttacctttcaggacagcataagattgtgtgcgcctccatcactggattc
cgctccttcgtacctcctccttccgactcttcagaccagagactgactgtggaggttact
ggacataaggctcatggacctgttcctcagccaggtgttgttgttacagccagagttact
aaggtgatggccaggatggcttcagcagatataatgtgtgttggtttccaggctgttcgt
gaaaaattcactggtatcatcaggcaacaggatgttagagcgactgagattgacaaagtt
gatatgcattcatcctttcgcccgggtgacattgttagagctttggtgctatcacttgga
gacgcacgtgcatattatctatcaactgcaaagaatgagctcggtgttgtatctgcagaa
agtgtagctggtgctaccatggttccgataagttggacagagatgcagtgcccccagaca
ggccaagttgaacagagaaaggttgctaaggttgaagcttga
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