Ipomoea nil (Japanese morning glory): 109172487
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Entry
109172487 CDS
T04663
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109172487
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109172487
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
109172487
NCBI-ProteinID:
XP_019177189
LinkDB
All DBs
Position
Un
AA seq
612 aa
AA seq
DB search
MDNGRVKVTLTNPSGSVAGIQYNGIDNVLEYTKKETDRGEWDIVWSSKNVYGRFDLLFAT
HFKVIVADQNQIEVSFMKYLNSHDRGSVPLIVDKRYVMLPRMSGFYTYAIFDHPRGWPDL
DIGEARLAFNLRKSLFNYMAISDDIQRVMPTAEDRKNGQTLGFREAALLTKPLNPSLKGE
VDDKYQYTLENKDNKVHGWICPKPHVGFWIIIGSNEFLSGGPIKQDLTSHVGPTSLMVFL
SDHYAGKGFSVRIRNGERWKKVFGPVFIYLNSDSGNNPRTLWENAKEMAIIENRKWPYNF
PRSHDYPSRNQRCTVAGRLLVSDRFISKGFMAAKFAYIGLALPGKPGSWQHDAKGYQFWT
RTNDKGYFKILAVRAGVYNLYAWIPGILGDFKYKKNIYLKPGDNIDVSNLLFYPPRNGPT
LWEIGIPDRKASEFFVPDPKPGRANRLFFHNKDNNYRQYGLWDRYTDYYPHQDLVYTVGK
SDYRKNWFFAHVNRVGRNHKYVPSTWRVLFWLNNVNRRGTYTLRIALAASSYAVISVWIN
NPHTRANHIVNGLGADNAIARHGIHGMYSEHSYSFSGSLLVKGRNTIFLKQARGGGPFIG
VMYDYIRLEGPK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgggcgtgtcaaagttaccttaaccaatccatctggatcagttgcaggaatt
cagtacaatggaattgataatgtactggaatatactaagaaagaaacagatagaggggaa
tgggatattgtttggagttctaagaacgtttatggcagatttgatcttctttttgcgaca
catttcaaggttatagtagctgaccaaaaccaaattgaggtttcatttatgaaatactta
aactctcatgatcgaggaagtgttcctctcatcgttgacaaaaggtacgtgatgctgcca
cgcatgagcggtttctatacatatgcaatattcgatcatcctcgaggatggcccgatctg
gacattggtgaagcaagacttgcattcaatctaagaaagagtttgttcaattatatggct
atatcagatgacattcaaagagtgatgccaaccgcagaagatcggaaaaatggtcagacc
cttggcttcagagaagctgctttattaaccaagccattgaatcctagtttgaaaggggag
gtggatgataaatatcaatataccttagaaaacaaagacaataaggtacacgggtggatt
tgccctaaaccacatgttggattttggattatcataggtagcaatgaattcttatctggc
ggtcctataaaacaagaccttacttcacatgttggcccgacttccttaatggtgtttctt
agtgatcattacgcaggaaaagggttttcagttcgcatacgaaatggggagagatggaaa
aaggttttcggtcctgtttttatatatctcaattcagattcaggcaacaatccacgaacc
ctttgggaaaatgctaaagaaatggcaattatagaaaatagaaaatggccatataatttt
ccaaggtcgcatgactatccctcgagaaatcaacggtgtacagttgcaggtcgattgcta
gtcagtgataggttcataagcaaagggtttatggctgccaaatttgcatacattgggctg
gccctacctgggaaacctggatcatggcaacacgacgccaagggctatcagttttggaca
cgaactaacgacaagggatacttcaaaatcttggctgttagagctggagtctacaattta
tacgcttggatccctggaattcttggagactttaaatacaaaaaaaacatttacctcaaa
ccaggagataatattgatgttagtaaccttttgttttatccaccaagaaacggtccaaca
ttatgggaaattggtatacccgatcgcaaggcttcagagttcttcgttcctgatcccaaa
cctgggcgggccaacagattattcttccataataaagataacaactatagacaatatgga
ttatgggatcgatacacagattattatcctcatcaagatttagtgtatacggtgggcaaa
agtgattacagaaaaaactggttctttgctcatgtaaatcgagttgggaggaaccataaa
tatgtaccctccacatggagagttttattttggttgaataatgttaatcggagaggaacc
tatacacttcgaatagcgttggctgcttcttcctatgccgttatatcagtttggattaac
aatccacatacacgagccaaccatatagtgaatggtcttggggcagacaatgcaattgcc
aggcatggaattcatgggatgtattcagagcacagttacagtttttcaggatctctactt
gtgaaaggcagaaacaccatttttttaaagcaagcaagaggtggaggtcccttcattgga
gtcatgtatgattacattcgtttggaaggccctaagtga
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