Ipomoea nil (Japanese morning glory): 109172510
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Entry
109172510 CDS
T04663
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109172510
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109172510
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
109172510
NCBI-ProteinID:
XP_019177208
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All DBs
Position
Un
AA seq
660 aa
AA seq
DB search
MLIIFFAQFFLLPAARFGMSREASPVLLDIQQGYAVMSNGILKVNMTVPGGFVIGISYQA
LHNLLSTDNPHNNRGYWSVTWNHLTNKTQIMDKLEGTSFKVIAQSEDQVEVSFTRTWNGS
ATHPPLHVDRRLIMLRGLSGFYTYSIYERLEGWPGMHVGENRLAFKLRQDMFDYMAISNG
RQRMMPTEEDRKTGQQLEYPEAVLLTNPIDPSIKGEVDDKYFYSKDSKDIKVHGWVSTKN
DPPLGFWMICPSMEFRIGGPFKQDLTSHVGPTLLSKFSGRHYAGRGLDITFQNGEPWKKV
FGPEFVYLNSDSSAENDPSLLWNDAWKRMNQEVENWPYDFPLSKDYMKSQQRGTVRGRLL
VHDWFSDEQPVPASNAYVGLALPGEPGSWQKENKGYQFWTEADKDGNFIIKGVIVGTYAL
HATVPGRIGNYKYDSFDVNIKPGSDIELGDLVYKPPRNGATLWDIGVAERTAAEFYIPNP
DPKYKVHKFKDQPKNKFREYGLWKRYADLYPDRDLVFIVGKSDYSKDWFFAHVTRELENG
TFGDTTRQIVFELQSVNKTSYYTLQLALAAAHQADIQLRFNDKDAELPHFSTGIIGTDNA
VARHGIHGLYWLFSFRVRGSWLVPGNNTIFMTNGGAFTRWRGLLYDYIRFEGPDQFKVSM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgttaataattttttttgctcagtttttcctgttgccggcagcccgttttgggatgtca
agggaagcctctccagtcctattggatatacagcaaggctatgcagtgatgagtaatggc
atccttaaagtcaatatgacagtcccaggaggttttgtcatagggatatcgtaccaagcg
cttcataatttactcagcacagacaacccacataacaatagaggatattggagtgttacg
tggaaccatctaacgaataaaacacagataatggacaagttagagggtacaagcttcaaa
gtcatagcacaaagtgaagatcaagtagaggtttcgtttacgagaacgtggaatggttct
gcaactcatccgccgttacatgttgatcgcagacttataatgttgcgggggttgtcgggt
ttctatacgtactctatatatgagcgattagaaggatggcctggcatgcatgtaggagag
aacaggcttgcgttcaaacttcgacaagatatgtttgattacatggctatctcaaatggg
agacagaggatgatgccaacagaagaggatcgtaaaactgggcagcaacttgagtaccca
gaagctgttctcttgacaaatccaattgatccatctatcaaaggagaggttgatgacaag
tacttctattcaaaagatagtaaagacattaaggttcatgggtgggtttctactaaaaat
gatcccccactgggattttggatgatctgtccaagcatggagtttcgtattggtggtcct
ttcaagcaagatttaacgtctcatgtcggccccactttactctctaagtttagcggtagg
cattatgctgggaggggcttagatattacgtttcaaaatggagagccatggaaaaaggtt
tttggtcctgaatttgtgtatctcaactcagattcttctgctgagaatgatccttctcta
ctctggaatgatgcatggaaaaggatgaatcaagaagttgaaaactggccatatgatttt
ccactttccaaggactacatgaaatctcagcaaagaggaaccgtcagaggtcgattactt
gttcatgattggttttccgatgaacaaccagttccagcatcaaatgcctatgtgggattg
gcgctgccgggtgaacctggatcgtggcaaaaagaaaacaagggatatcaattctggaca
gaagcagataaagatgggaacttcatcatcaaaggtgtaatagtggggacttatgctcta
catgcaacagttccagggaggattgggaactacaaatatgatagctttgatgtcaacatt
aaaccaggttctgatattgaactgggagatttagtgtataaacctccaagaaatggagcc
acactttgggatataggtgttgcagagcgtacagctgctgaattttacatcccaaacccc
gatcccaagtacaaagtccacaaattcaaagatcaaccgaaaaataagttcagagaatat
ggcctttggaagcgctacgcagatttgtatcctgatcgagatcttgtcttcattgttgga
aaaagtgactactctaaagattggttttttgctcatgtcaccagagaacttgaaaatgga
acgtttggggacaccacaaggcaaattgtatttgagcttcaaagtgtaaataaaacctca
tattacacactccaattggcactggcagcagcccatcaagcagacatacaattacgtttc
aacgacaaagatgcagaacttccccatttctcgacggggattataggcacagacaacgcc
gtagcaagacatgggattcatgggctgtattggctcttcagtttcagggtaaggggatca
tggcttgtcccaggaaacaacacaatatttatgactaatggaggagctttcactcgttgg
agaggtctcttatatgactatataaggttcgaaggtcctgaccagtttaaggtttctatg
taa
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