Ipomoea nil (Japanese morning glory): 109172557
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Entry
109172557 CDS
T04663
Name
(RefSeq) crossover junction endonuclease EME1B-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109172557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109172557
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109172557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
DUF4337
Motif
Other DBs
NCBI-GeneID:
109172557
NCBI-ProteinID:
XP_019177274
LinkDB
All DBs
Position
Un
AA seq
641 aa
AA seq
DB search
MSQPVPVDILSDSDDDRCGAGGGRYRRDAIDLSTPLAVTLKKRRTELDSNHTVFVIDDDQ
TPGKPSLGLAASTSTPSYVPETPFSDLSKPDFSIVKCSNFSSSISYPTSPGPSVVEETPI
SEKSRFDIPMAKCTKGIEVSQDLASSVVNNHKCSGTSQLICLDSDNVSEDGSEFVAPKKN
DSIGFAVEMECGSKLSTGFIQSTCFLGNADIMEVSASGFQPTSFQKDASLDHCCPSEEID
RLEPFENHCPSEEIERLEPFEKVLKPNSKTRGNSSRKNKVDEEKEKKRILKEERLRLKEE
KKLQKEQEKMQKAAQKAEAIEMKKLQKEKQKWETGKLALKSIVALIDTRVVELGSIGGHL
ITRLAEKGLSYRITTNPIEKSILWTMGIPEQLSEIASEPVDIRYVLLVYEAEEFINLVLN
GSFLDHASKVRSLFPLHTLCYLTNRLMSYINKREQAQYKDPSNKTSWKRPPIEEVLANLT
TQFVGVHSRQCIDEAEVAEHIVGLTSSLASCQYRKKLSRLSVNANGSLVPKDCVDKNMIK
KSPWLKALVAIPKVQPRFAIAIWKKYPTMKSLLSVYMDSNKSVHEKEFLLSDLRIEGLLG
DTRRLGDICSKRVYRILMAQSGGITTDDIECGADFFGQPSV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccggtcccggtagacatcctctccgactccgacgatgatcgctgcggcgca
ggcggcggccgctatcgacgcgacgccatcgacctctcgaccccattggcagtcactttg
aagaagcggaggacggagctcgactcgaaccacacggttttcgtcattgatgatgaccaa
accccggggaaaccttctctgggcctcgccgcatccacctcgactccttcttacgtgccc
gagacccccttctccgacttatccaaacctgatttctccattgttaaatgctccaatttc
tcctcttcaatttcataccccacttccccaggaccatctgtggttgaggagactccaata
tctgagaaatcaagattcgatattccaatggctaaatgcaccaagggcattgaggtttca
caagacctagcttcctcagttgtgaacaatcataaatgttcgggaactagtcagttgatc
tgtttggattctgataatgtgtctgaggatggtagtgagtttgttgccccaaaaaagaat
gacagcattggtttcgctgttgaaatggaatgtggatcaaaattgagcactggatttatt
cagtccacatgttttcttggtaatgctgatattatggaagtatcagctagtggttttcag
ccaacttcatttcaaaaggatgcttctttggaccattgttgcccttctgaagaaattgat
agattggagccctttgaaaatcattgcccttctgaagaaattgagagattggagcccttt
gaaaaggttttgaaaccaaatagtaaaaccagaggtaactcaagtaggaaaaataaagtt
gatgaagaaaaggagaaaaaaaggattttgaaggaagaacgtcttcgtttaaaggaagaa
aagaaattgcaaaaagaacaagagaaaatgcagaaggctgctcagaaggctgaagctata
gagatgaaaaagctgcaaaaagaaaagcagaagtgggaaacgggaaaacttgcactaaag
tccatcgtggctctcattgatactagagtagtggaactaggttcaataggaggtcattta
ataacaagacttgcagagaaaggtctttcttatcgaataacaacaaatccaattgaaaag
tctattctgtggactatgggcattccagaacaactatcagagattgcatctgagccagtc
gacatccggtacgtgttacttgtatatgaggctgaggagttcatcaacctggtcttgaat
ggatctttcctggatcatgcttccaaagtgcggagcctttttcctttacatacgctatgc
tatctcacaaataggcttatgtcttacattaataaaagagagcaggcacaatacaaggat
cccagcaacaaaactagttggaaacgcccacctattgaggaggttttggcaaacttaacc
actcagtttgttggtgtacattcaaggcagtgcattgatgaagcagaagtagcagaacat
attgtaggtttaacaagtagtcttgcatcttgccaatacagaaagaagttatctagacta
tcagtaaatgcaaacgggtcccttgttcccaaggattgtgttgacaagaatatgataaag
aagagcccatggttgaaagcattggtggctattcctaaggtacaacctcgattcgccatt
gccatatggaagaaatatccaacaatgaaatctctcctcagtgtatacatggactcaaat
aaatcagtacatgaaaaggagtttctgctttcagatcttagaatagaaggtttgctaggc
gacactagaagattaggagatatttgttctaagagagtgtacagaatactaatggctcaa
tctggaggcatcacaactgatgacattgaatgtggagctgatttctttggccaaccctcg
gtctga
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