Ipomoea nil (Japanese morning glory): 109172640
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Entry
109172640 CDS
T04663
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109172640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109172640
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
90S particles
GTPase
109172640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
MMR_HSR1
AAA_22
AAA
AAA_16
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
109172640
NCBI-ProteinID:
XP_019177385
LinkDB
All DBs
Position
Un
AA seq
1181 aa
AA seq
DB search
MAVEGSKEQSHKSHRKRQSGSSAKKKSKSIDESQKQKNPKAFAFTSTVKAKRLQSRATEK
EQRRLHVPTIDRSTGEPAPFVVVVQGPPKVGKSLLIKTLVKHYTKHNLPEVRGPITIVSG
KQRRLQFVECPNDINGMIDVAKFADLALLLIDGSYGFEMETFEFLNILQNHGFPKVMGVL
THLDKFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREVHNLARFISVMK
FPPLSWRMSHPYIMVDRFEDVTPPEKVEMNNKCDRNVTLYGYLRGCNLKKGAKVHIAGVG
DFNLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHFVQF
SKADDANAEKNHDVGEVLVKSLQNTKYSIDEKLEQSFISLFGKKPNTSSVSQLEAKDLPD
QETDIDNMDDSESSDGERDHSDDVSDEENDIRSEQGTTSNNGFREQVDFHDGRMRRKAIF
DNDNDLDDAEDNDEDSEELDEEVEGDDSDNSDEEEESEPDVAAENSSEHRDGVELGNASR
WKESLAERAHSRQSLNLMQLVYGKAASKSTTASEMEQISEDDESDDDEFFKPKGEGKKKG
KDVLYDDNQDAEDCSKFLSHASEKNWKDENLIEGIRNRFVTKGWSKATAAGVSTDAVSDD
NDGDGDDDDVFGDFEDLETGQKYQSQQRNDASAKSDEALAAEERKLKKLALRAKFDAQYN
DSESADEGNDNKPGADSRGQASGSGYFDKLKDEIELRKQQNLAELNELDDATRIEIEGFR
TGMYVRLEVHDVPFEMVEYFDPCHPVLVGGLALGEENVGYMQVRLKRHRWHKKVLKTRDP
IIVSIGWRRYQTTPIYAIEDLNGRYRMLKYTPEHMHCLAMFWGPLAPPRTGMIAVQNLSN
NQAEFRITATATVLEFNHAARIVKKIKLVGHPCKIFKKTALIKDMFTSDLEIARFEGAAI
RTVSGIRGQVKKAAGEEIGNQAKKKGGLAKEGIARCTFEDRILMSDIVFLRAWTQVEVPQ
FYNPLTTALQPRGKTWQGMKTVSELRREHNVPVPVNKDSLYKAIERKPRKFNPLVIPKSL
QAALPFSSKPKDTPSRRRPTLENRRAVVMEPNEKKLQRVLQHLRLIRSEKVKKRKLKDQE
RKKAAEAEKAKEELVSKKRQREERRDRYRVQDKLKKRSRRD
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgaaggcagtaaggagcagtcgcacaagtcgcacaggaagcggcagtctggc
tcctcagctaagaagaaatcgaagtccattgacgaaagtcaaaaacaaaaaaatcctaag
gcgtttgcattcacttcaacagtaaaagccaagcggctgcaatcccgagctaccgagaag
gagcagcggaggcttcatgtcccgacaattgaccgctccaccggggagccagctcccttt
gttgttgtagtccagggaccgcccaaggtcggaaaatcgctgcttataaagactcttgtc
aagcactacacaaagcataatttacctgaagttcgtggtcctattactattgtatcagga
aagcaaaggcgtttgcagtttgtggagtgcccaaatgatatcaatggcatgattgatgtt
gcaaagtttgctgatttagcattgcttctcattgatggaagctatggatttgaaatggaa
acttttgagttccttaatatattgcaaaatcatgggttccctaaagttatgggtgttctc
actcacttggacaaattcaaagatgtgaagaaacttaagaaaacaaagcaaagattaaag
catcgattctggacagagatatacgatggagctaaattgttctatttatctggtcttatt
catggaaagtatgccaaacgtgaagtacataaccttgcaaggtttatttctgttatgaag
tttcctccactgtcatggcgaatgtcccatccttacatcatggtagaccgttttgaagat
gtaactcctccggaaaaagtggaaatgaataataagtgcgacaggaatgttactttgtat
ggatatttacgtggttgtaatctgaagaagggagcaaaggtgcatattgctggggttggt
gatttcaatttggctggtgttacagctctagccgatccatgcccactaccatcagcagct
aagaagaagggcttaagggacaaggaaaagttgttttatgcacctatgtctggacttgga
gaccttctttatgataaggatgctgtgtacattaacataaatgatcactttgttcagttc
tctaaagcagatgatgcaaatgctgagaagaaccatgatgttggggaggttttagttaaa
tcacttcagaatactaaatattcaattgatgagaagttggaacagagttttatctctctc
tttggcaaaaagcccaacacatcatcagtgtcccagttggaagctaaagatttaccagac
caagaaactgatattgataacatggatgactcagagtcttcagatggggagagagatcac
tctgatgatgtttctgatgaagaaaatgatattaggtcagagcaagggaccacatctaat
aatggttttagagagcaagtcgatttccatgatggaaggatgaggagaaaagctatcttt
gacaatgacaatgaccttgatgatgcggaggataatgatgaagatagtgaagaactagat
gaagaggtggaaggtgatgattcagataattctgatgaggaagaagaatctgaacctgat
gtagctgctgaaaactcatcagaacatagagatggagttgagttaggaaatgcttcaaga
tggaaagagtcattagcagaacgggctcattcaaggcagagtcttaatcttatgcaactt
gtatatgggaaagctgcatcaaagtcaacaactgcttctgagatggaacagattagtgaa
gatgatgaaagtgacgatgatgaattcttcaagccaaaaggggaaggaaagaagaaagga
aaagatgtcttatatgatgataatcaagatgctgaggactgctctaaattcctcagccat
gcaagtgaaaaaaactggaaggatgaaaatttgattgagggcattcgcaatcgttttgtc
actaaaggttggtcgaaggccactgctgcaggtgtatccacggatgctgttagtgatgac
aatgatggtgatggtgatgatgatgatgtatttggtgattttgaagacttggaaacaggg
caaaaatatcagagccaacagagaaatgatgcttctgctaaaagtgatgaagctttggca
gctgaggaacgaaagctcaaaaagttggctcttcgtgccaaatttgatgctcaatataat
gattcggaatctgctgatgagggcaatgataataaacctggcgctgactctcgaggtcaa
gccagtggaagtggatactttgataagttgaaggatgagattgaacttcgcaaacaacaa
aatttagctgaacttaatgaacttgatgatgccacacggatagaaatagaaggtttcaga
acagggatgtatgttaggcttgaagtccatgatgttccctttgagatggttgaatatttc
gatccttgtcatccagttctagttggagggcttgctcttggtgaagaaaatgttggatac
atgcaggtccgattaaagaggcaccgatggcacaagaaagtactgaagactagagatcca
attattgtttctattggatggaggcgttaccaaactactccaatttatgctattgaggac
cttaatggtcgctaccggatgcttaagtacacacctgaacatatgcattgccttgccatg
ttttggggtcctctggcaccaccacgcactggaatgattgctgtccagaatttatcaaat
aatcaggcagaattcaggattacagcaactgcaactgtgctagagttcaatcatgctgca
cgtatagtgaaaaagattaagctagttggtcacccatgtaaaatcttcaagaagactgct
cttattaaggatatgttcacttcagatcttgaaatagccaggtttgaaggtgccgctatt
cgaactgttagtggaatccgtgggcaggtgaaaaaggctgctggagaagagattggtaac
caggccaagaagaagggcggacttgccaaagaaggcatcgctaggtgcacatttgaagat
aggattctgatgagtgacattgttttcttgcgtgcttggactcaagttgaagttcctcag
ttttacaatccattgactactgcattgcagccacgtggtaagacctggcaaggaatgaaa
acagtttccgagttaaggagagaacataatgtgcctgttccagtgaacaaggactcgttg
tataaggcaatcgaaagaaaaccaagaaagttcaatcccttggttattcccaagtcattg
caagcagctctccccttctcctcaaaaccaaaggatactccatctcggaggaggcctact
ctggaaaataggagggcagttgtgatggaacctaatgagaagaaactgcaacgtgttctt
caacatctccggcttattaggagtgagaaggttaaaaagcgtaaactcaaagaccaagaa
aggaagaaagcagctgaagcggagaaggccaaggaagaactagtgtcgaagaagcggcag
agagaagaacgtcgagataggtatcgtgtgcaggacaaactgaagaagagaagtcgcaga
gattaa
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