Ipomoea nil (Japanese morning glory): 109172756
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Entry
109172756 CDS
T04663
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109172756
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109172756
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
RhgB_N
Dioxygenase_C
Motif
Other DBs
NCBI-GeneID:
109172756
NCBI-ProteinID:
XP_019177551
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All DBs
Position
Un
AA seq
665 aa
AA seq
DB search
MMMSERQSRSVLWWFGIAFQLLVLVDYCSIMAAARSTSSPLTLKITKKHVVMDNGLIKVT
LSNPTGAIAGIQYNGIDNVLESGFRETNRGYWDIVWSKPDMPSSLFNMLPATNFTVIAQD
ESQIEVSFTITFNPDDDTSVPMNFDKRYVMLPGRSGFYSYAIYDHPQGWLDVNIDETRLA
IKLSQNMFHYMAISDDIQRVMPSANDRSSGQTLEYKEAVLLTDPTNPKLKGQVDDKYQYS
LESKDMDVHGWVCFKPHVGFWVITGSDEFRSGGPIKQDLTSHVGPTSLSTFFSAHYAGDD
FGLRLRNGEAWKKVFGPVFLYLNRDSSDNPRVLWEDAKQQMLAETKNWPYNFPKSKDYVT
RNLRGTITGQLIVRERYMNKEVTPAKSAHIGLAPPGEAGSWQHDVKGYQFWTQTDNDGNF
EINAIRPGNYSLYAWIPGILGDYKYNVNLNIKPGDNINVGGLVYNPPRNGPTIWEIGIPD
RKAAEFFIPKPAPDLMNYAFNNQTQNFRQYGLWDRYTDLYPDKDLVYKVGKSDYTKDWFF
AHVNRRVGKKTYVPTTWRISFPLENVNRTGTYTLRIALASSNYATIQVWINSEKTIQPRF
TINGLGRDNAIARHGIHGLYSEHSFDIPGFQFLKGENTIYLRQPKGGNPFIGVMYDYIRL
EGPNN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcggagaggcaaagccgttcagttttatggtggtttggaatagcttttcag
cttctggtgctagtagattattgttctataatggccgcagcaaggtcaacatcttcgcca
ttgacactgaaaattacgaaaaagcatgtggtgatggacaatggcctaatcaaagtcacc
ttaagcaatccaaccggtgcaattgcgggaattcaatacaacggaattgataatgtactg
gaaagcggttttagagaaacaaatagggggtattgggacatcgtatggagcaagccagac
atgcctagtagtctgtttaatatgcttccagccacaaatttcacagtaattgcgcaagat
gaaagccaaatcgaggtttccttcacaataacattcaaccccgatgatgacactagtgtt
cccatgaactttgacaaaaggtatgtaatgttgccgggacgttctggtttctactcatac
gcaatatacgatcacccacaaggatggcttgacgtcaacattgacgaaaccaggcttgca
atcaagctaagtcagaatatgttccactatatggctatatctgatgacatccaaagagtg
atgcccagtgctaatgatcgatcatcaggtcagactcttgagtacaaagaagctgtgttg
ttaactgaccctacaaatcctaagctcaaaggccaggtagacgacaaataccaatactct
ttagaaagtaaagatatggatgtacatggatgggtttgctttaaaccacacgtggggttt
tgggtaatcaccggaagtgatgagttccgttctggtggacctataaagcaagacctcact
tcacatgttggtccgacttccttatcgacatttttcagtgctcattatgctggggatgat
tttgggctgaggttgagaaatggtgaggcttggaaaaaggtttttggccctgtttttctc
tatctcaacagagattcaagtgacaaccctcgagtcctttgggaagatgctaaacaacaa
atgttagccgaaactaaaaactggccttataattttcctaagtcgaaagactacgttact
agaaatctacgtggtacgattactggtcaattaattgtccgtgagaggtacatgaataaa
gaggttacgccagcaaaatctgcacacattgggctagccccacctggagaagctggatca
tggcaacatgatgtcaagggctatcaattttggactcagacagacaacgatgggaacttc
gagatcaatgctattaggcctggaaactacagcttatacgcatggatccctggaattctt
ggagattataaatacaacgttaaccttaacatcaaaccaggagataatattaatgttggt
ggtcttgtttataatccaccgagaaacggtccaacaatatgggaaatcggcattcctgat
aggaaggccgcggagttcttcatccctaagcccgcccctgatctaatgaactatgcattc
aacaatcaaacacaaaactttagacaatacggcctatgggatcgttacacagatttatat
cccgataaagatttagtttacaaagttggcaaaagtgattatacaaaagattggtttttt
gctcatgtgaacaggagagttgggaagaaaacatacgtaccaacaacatggagaatttca
tttccacttgaaaacgttaaccgaacaggaacatatacattgcgaatagcgttggcttct
tccaactatgccaccattcaagtttggataaatagtgaaaaaactatacaaccaaggttc
acaataaatggacttggaagggacaatgcaatagcaaggcatggaattcatgggctatat
tcagagcacagctttgatattccaggattccaattcctgaaaggagaaaacacaatatat
ttaaggcagccaaaaggtggaaatcccttcattggggttatgtatgactacatccgttta
gaaggcccaaataattga
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