Ipomoea nil (Japanese morning glory): 109172840
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Entry
109172840 CDS
T04663
Name
(RefSeq) uncharacterized LOC109172840
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109172840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109172840
03016 Transfer RNA biogenesis [BR:
ini03016
]
109172840
03029 Mitochondrial biogenesis [BR:
ini03029
]
109172840
Enzymes [BR:
ini01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
109172840
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
109172840
Transfer RNA biogenesis [BR:
ini03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
109172840
Mitochondrial biogenesis [BR:
ini03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
109172840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
109172840
NCBI-ProteinID:
XP_019177612
LinkDB
All DBs
Position
Un
AA seq
617 aa
AA seq
DB search
MGYFDLNVPYFESDRHVANKNTAKAMRLKLIIKAMELGYTGVAYNRTIKGVMSESDRCSI
PLFPLSSILKLAPSISSAVKLHRELLSVPVSAPFRQYTRLTVMVDSPAQASVLNFGNPVL
KSYDIVAVKPLNQNAFDHACRTSEVDIITIDFSEKLLFRLKQPMVKAAIQRGVYFEITYS
SLLIDAQARRQMISNAKLLVDWSRGKNIILTSDAPSVTEFRGPYDVVNLVSLLGLSLEHA
KAALSKNCSLCIYRRTLIENALRKKCYYKETIKVEAISSARQANSDKPAFDDWLKWDPIS
SGEGDLLLDDIEKFFSAPSNVSQNVKPIDFTSAMNGLPPHGLQIRDVISSRDLEPKLLDA
APDSGVLELQLESHLAKSEEQDALQGDATIYTCREDGKSSCGNEMLEIESESQVANSEEQ
NTLPDSATSYTSIVDADVSLYHANLTSAEISAPSDNSTLITSHIEDSMIPDRLDTGLQAQ
GVAIDKAFIDTKDLCEKEPCLVSYNVGSHNELVERAETRDFSVSLADGLPVRNSSSPMKD
NNECNPAECELMEDDEQDQMETGSQSRLRYQIHSAPLSGRKGRKKLLHRPLLFPFKGLLN
HRHSKRKARRLDRVSKT
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggggtacttcgacctgaacgttccgtattttgaatccgaccgccatgtcgccaacaag
aacaccgcgaaggccatgcgcctcaagctcatcatcaaggccatggagctcggctacacc
ggagtagcctacaaccgcacgatcaagggcgttatgtccgaatcggaccgttgctccatt
cctctcttcccactctcatccatcctcaagctcgctccttctatctcctccgccgtcaag
ctccatcgcgaactcctcagcgtccccgtttccgccccctttcgccagtacactcgcttg
actgtaatggtcgatagccccgctcaagcctcggttctcaactttggaaaccctgtttta
aagagctacgacatcgttgccgtcaagccgctcaatcagaatgctttcgaccatgcttgc
cggacttccgaggtggatattattaccattgatttctcagagaagttgctgtttagattg
aagcagcccatggttaaagcggctatccagcgtggggtttattttgagataacttactca
agtcttcttatcgatgctcaagcaaggaggcaaatgatatctaatgccaagctattggtg
gattggtcacgagggaagaatattattcttacaagtgatgctccttctgtaactgaattt
agagggccatatgatgtagtgaatttggtatctctgcttggtctttccttggaacatgct
aaagcagctctttccaaaaattgcagtctctgtatatatcgcagaactcttatagaaaat
gctttgaggaaaaagtgctattacaaggaaaccattaaggttgaggcaatatcctcggca
agacaggccaattccgataagcctgcatttgatgattggcttaaatgggatcccatctca
agcggtgagggtgatttgctattagatgacattgagaaattcttctcagctcccagcaat
gtatcacaaaatgtgaagcccatagattttacctctgctatgaatggtctccctccacac
ggtctccagatcagagatgtgatatcttcaagggatttagaaccaaagcttctggatgct
gctcctgacagtggagtgcttgaattgcaattggaaagtcacctagctaaatctgaagaa
caagatgccttgcaaggtgatgcaacaatttacacttgcagagaggatggcaaaagctct
tgcggtaatgaaatgcttgaaatagaatcagaaagtcaggtagctaattctgaagaacaa
aataccttgccagatagtgcaacaagttacacttccatagttgatgctgatgtatctttg
taccatgctaatctcacctcagctgaaatatctgctccatcagacaattctaccttaatt
acttcacacattgaagattctatgataccagatagacttgacactggtcttcaggcacaa
ggtgttgctattgataaagccttcatagatacaaaggacctctgtgagaaggaaccatgt
ttggtgtcttataatgtgggttcgcacaatgagttagttgagagagcagaaactagggat
ttttctgttagtttggctgatggattgcctgtgagaaattctagtagtcccatgaaagac
aataatgagtgtaatcctgctgaatgtgaactaatggaagacgatgagcaagatcaaatg
gaaacaggcagccagtctagactaagatatcaaatccacagtgcacctctttcagggaga
aaaggccgaaagaagctgttacatcgccctcttttgtttcctttcaaagggttgttgaat
catagacattcgaagaggaaggctcgcaggttagatcgggtttcaaaaacctaa
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