Ipomoea nil (Japanese morning glory): 109173631
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Entry
109173631 CDS
T04663
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00750
Vitamin B6 metabolism
ini01100
Metabolic pathways
ini01240
Biosynthesis of cofactors
Module
ini_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
109173631
Enzymes [BR:
ini01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
109173631
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
Motif
Other DBs
NCBI-GeneID:
109173631
NCBI-ProteinID:
XP_019178425
LinkDB
All DBs
Position
Un
AA seq
310 aa
AA seq
DB search
MSGSGVVTLYSNGAIAETTKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM
ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE
SEVLTLADDENHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIIEAVRH
VRSVMGDIRVLRNMDDDEVFTFAKKIQAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL
MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPEVLADISCGLGEAMVGINLNDD
KVERYANRSE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagcggtgtcgttacactctattctaacggcgctatcgccgagaccaccaag
aaatcccccttctccgtgaaggtggggctggcacaaatgctccgtggcggcgtgatcatg
gacgtcgtcaacgcggagcaggcccgtattgccgaggaggccggcgcgtgcgccgtcatg
gctctggagcgcgtccccgcggatataagagctcagggcggcgtggcccgcatgtccgac
cctcagctgattaaggagatcaagcaggcggtgactattccggtgatggcgaaggcccgg
attgggcatttcgtggaggcgcagattctcgaggctattgggattgattacgtggatgaa
tcggaggtcctcaccctcgccgacgacgagaaccatatcaacaagcacaatttccgcatc
cccttcgtgtgcggctgccggaacctgggcgaagccctccgccgcgtccgggagggggcc
gcgatgatccgcaccaagggcgaggcgggcaccggcaacatcatcgaggccgtccgccac
gtccgctccgtgatgggcgacatccgggtcctccggaacatggacgacgacgaggtgttc
accttcgccaagaagattcaggccccctatgatctcgttatgcagaccaagcagctaggc
aggcttcccgtggtccacttcgccgctggcggggtggcgacccctgccgatgccgcgctg
atgatgcagctcggatgcgacggcgtgttcgtcggctccggcgttttcaagagcggcgat
ccggccaggagggcccgcgccatcgtgcaggcggtcacccattacagtgatccggaggtg
ttggctgacataagctgcggactgggagaagccatggttggaatcaacctcaatgatgac
aaggtggaaaggtatgccaaccgctccgagtga
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