Ipomoea nil (Japanese morning glory): 109173681
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Entry
109173681 CDS
T04663
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109173681
03015 mRNA surveillance pathway
109173681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109173681
03041 Spliceosome [BR:
ini03041
]
109173681
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109173681
Spliceosome [BR:
ini03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109173681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109173681
NCBI-ProteinID:
XP_019178502
LinkDB
All DBs
Position
Un
AA seq
891 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDMGKVKMDVMRPWIAKRVTELV
GIEDEVLINFIYSLLEGKDVNGKEVQIQLTGFMERNTGKFMKELWSLLLSAQNNASGVPQ
QFLDAKEEETRKKKAETDRITNEIQRRKEREYQELEQEKKKADGDVDISRDTHAALEPSS
KHHTRDSPMPSAEKVYADKNGSRGRNRSERASRSPNSADHSPLPRDRRSRSISRSFSNSR
SYSGERRRSRSRSSPEQRGRSISSERARPSPVKRSITPRHKYSPRRSVSVSPPRRRRRSV
SRSRRRSPSPTRYRRHSPLRRRSRSPKRRRSRSPIWRRSRSPIRRSPMRHRLRSPLRPRS
PLRRRSPSPVRRRTPSHIRHRSPSPFKRRSRHSPLSPRRGSPTTVRRPISGRRVSRSPVR
RRSRSPIQRRSASPEYSISASPVHHRALSPIKKRTPKRERMSPVHSPPERMRSHGKYSPS
RSSSEDGSQPTVVRKESNIVGRRQPISSRSPRSDLYDRKSSHHKRSPSPRKSPSFSESPP
RRSPPSMSESLARRSPSISDSRQRKPPSISESPPAARERSPSEERSRSPNKRILNERRGK
IIRTGSPSPLRKQREHKLHHDAYERSPDERDVNSLRGPVETRSHSNGSGSRKPKEAMRGE
KASGRMDHIKDFDDRQRSPVTHRGSHVAKKDRESLDLESPKADEKNLSRLNAIQGEDQPV
EAKHLHETSRKVEDVEQIIYKNSGSEECDKRRSRVKEKRKHKRSVRHESTSDDDSSYDSG
VDERKEAKRRKKEEKKEEKKLRKEEKRRRRDDRRRKKEERRAGKQKLKSDNAISSPSDAE
KTNDGNVSDEDLARKEFHGREIEGTDSAKKLEIELREKALESLRAKKSIGH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagggtttttccggggcacgtccgccgatcaggatactcgcttctccaacaag
caagctaagctattgaaatcgcagaagttcgctcccgaattggagcatctggtggatatg
gggaaagtaaagatggatgtaatgagaccttggatagcgaagcgagttactgagctcgta
gggattgaagatgaagtgcttatcaacttcatatatagtcttctagaaggaaaggatgtt
aatgggaaagaggttcaaattcaactgactggattcatggaaaggaatactggaaagttc
atgaaagagctctggtcactactccttagtgcacagaacaatgcaagtggtgttcctcag
cagttcctggatgccaaggaagaggaaacaaggaagaaaaaggctgagactgatcgaata
acaaatgaaatacagaggagaaaagagagagaatatcaagaacttgagcaagaaaaaaag
aaggcggacggcgatgttgacatttcaagagatacgcatgctgctttggaaccatcttca
aagcatcacactagggattcccccatgccttcagctgaaaaggtgtatgctgacaaaaat
ggttcaagaggaagaaacaggtcagaaagggcctcaaggtctccaaactcagctgatcat
tcaccactaccaagggacagacgttcaaggtcaattagcaggtcattttccaactctagg
agttactcaggggaaaggcgtaggtcaaggagtagatctagtcctgaacaaagagggcgt
tccatatcttctgaaagggcacgcccctctccggtgaagcggtcaattacacctcgccat
aaatattcacctcgacgatctgtgtctgtgtctccaccaaggcgaaggcgtagatcggtg
tctcgttcacgtcgtaggtcaccttctcctacgcgataccgcaggcattctccattgcga
cgtaggtcgaggtctccaaaacgacgaagatcacgatcaccaatctggcgtaggtcaagg
tcaccaattcgacggtcaccaatgagacatcgactccggtcacctttaaggcctcggtca
cctttaaggcgtcgatctccatctcctgttcgtcgaagaacgccatcccatatacgtcat
agatcaccatcccccttcaagcgacgttccagacattctcctttgagtccacggcgtggt
tctccaactactgttcgacgccccatttctggccgcagggtatccaggtccccagtcagg
agaagatctaggtcacctattcaaaggaggtctgcttcacctgaatactcgatttctgca
tcaccagttcatcacagggccctttcaccaattaagaagagaacaccaaagcgtgagagg
atgtcacctgttcattctcctccggaaagaatgagaagccatgggaaatactctcccagc
cgttcatcttcagaggatggttcacaacctacagtggttcgtaaggaatccaatattgtg
ggacgcaggcaacctatttcttctaggtcaccaaggagcgatttatatgatagaaagtct
tcacatcataaaaggtcaccttcaccacggaagtccccatctttttcagaatctccaccc
cgtaggtctcctccatctatgtcagaatctctggctcgtcggtctccatctatttcagac
tctcgacagcgtaaacccccatccatttcagaatctccaccagctgccagggaaagaagt
cccagtgaagagaggtcaaggagtcccaataagagaattttgaatgaaaggaggggaaag
ataattcgaactggaagtccaagtcctttgagaaaacaaagagagcataaattgcatcat
gatgcatatgagagaagcccagatgagagggatgtgaattctttaaggggacctgttgag
actaggagccactctaatgggtctgggtcaaggaagccaaaagaagccatgagaggtgaa
aaagcatctggaaggatggatcacatcaaagattttgatgatcgacagaggtcacctgtg
actcatagaggctcacatgtagctaagaaggatagggaatcattggatctggagagcccc
aaagctgatgagaagaacctcagtcgtttaaatgccatccagggagaggatcagcctgtt
gaggcaaaacatttacatgagacatctaggaaagtggaggatgttgaacaaataatttat
aagaattcaggttctgaggaatgtgataagcgaagatctagagttaaggaaaagaggaag
cacaagagatctgtcagacatgagtcaacttctgatgatgattctagttatgattcaggt
gtggatgagaggaaggaggctaagaggaggaagaaagaagagaagaaagaagagaagaaa
ttgaggaaggaggagaagcgtcgacgtcgggatgatagacgtcgtaagaaggaagagagg
cgtgctgggaaacaaaaattgaagtcagataatgctatatcttcgccttctgatgctgag
aagactaacgatggtaatgtttcggatgaggaccttgccagaaaagagtttcatggacgt
gagattgaagggacggattcagcgaagaagcttgaaattgagttgcgagagaaggctctt
gagtctctcagagcaaaaaagagcattggccactaa
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