Ipomoea nil (Japanese morning glory): 109174880
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Entry
109174880 CDS
T04663
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109174880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109174880
Membrane trafficking [BR:
ini04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109174880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
TPR_VPS8_2
WD40
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
PQQ_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109174880
NCBI-ProteinID:
XP_019179664
LinkDB
All DBs
Position
Un
AA seq
1945 aa
AA seq
DB search
MMMELDLDSILHSHAHTFSDDDDDHFIPHRTVDEILLNHSSSSSASPSPPPSPSTSVRCQ
EHSDGSSLSPSSEALRLQHSQSLSSELNPSASIISRIKSDDFSSLPPFLSGVIRSNAKPG
AALAAAAAASRSIPTPHAAAIRRAGSSSATVRKVFKHSRDLVSSAASDAAEVASSSSAGT
VEGLVATDDIFTPGSSNILDNFQFPKLQRTDRADSSGELSLPDKTQESLSETSGVLAKAD
ADLVSKVGNSGQSSSTTPVETSIDSAISSKRCLDVDGNSVQSELLERKYDNGQHLPANED
NTVHTETITTVEDILPSSVSGCEVSSDEEISPTVPEMELENVVPDTGNREVLSGEDNSSS
KNEAADILEEQVMQEDGKRDSIKTGKKSLPSLRPIELAEELEKKQTFAGMHWEEGAAAQP
MRLEGVRRGSTALGYFDISAENTLTHNFSSPTFRQDHGSPQVLTVHLNYIAVGMSKGLVI
IVPSRYTPHQVDNMDAKMLMLSLHGERAHIPVTSLCFNHQGDLLFAGYGDGQYTVWDVQR
ASAAKVVTEHKAPVVHLFFLGQDSRQFNVISGDSKGIVKLIRFSIVPWLNRISFSKSMKL
LDETTSTVVCASPLLSGDSLGTALTPSLDSNSVPGGSVGSMMGGMVGGDTGWKLFDGSSL
SEEGVVVFVTHQSALVAKVSPNVEVYAQLPRPDGVREGCMPYAAWKCVPGMHNSSNENVP
VESSHKVSLLAIAWDHKIQVAKLVKSDLKVLWEWTLDNSAVGVAWLDDQMLVILTSTGQL
CLFEKDGNLIHQTSFSTDGPCGDDLISYHTYFSNAHGNPEKAHHNCIAVRGANVYILGTL
QLVVSRLLPWKERIEVLRKAGDWMGALNMAMTLYDGQAHGVIDLPRNLSDVQKTVMPYLV
ELLLSYVEEVFSYLSVAFSNQSGKLCHSDESNDRSHLMHPEIKEQYARVGGVAVEFCLHI
KKTDVLFDEIWKRFDNEKQQDTFLELLEPYILKDMLGSLPPEIMQVLVEHYSNKGWLQRV
EQCVLHMDISSLDFNQVVRICREHMLYGALIYLFNKGLGDFKAPLEELFSIIRNSKGETA
APFGYKMLVYLKYCFQGLAFPPGHGTLSTKILPSLRKELVQFLLEDSCLPNSLAISSFPA
NGPHPNLLYLLQLDTEATLDILQCAFVEDVPQLDHISDDSANSYTESAEVNGLSDSQNLV
QELVDVLAAILDASFFQSSNSCSSGDDRSIDIWPSKRERDHILDFIAYYVSWERAKVSKS
TLSQILEYLTSEIDSSDNASENDETSKRRQKQLVTLLEVLPEHEWDAPYLLHLCEKVQFQ
QVCGFIHSIRHQYLAALDSYIKDVDDPIHSFSFIHDMLQQLGNKDSDAFRSAVISRIPDL
VKLSREDTFFMVISHFGEKFQHILSELRSHPKSLFLYLKTLTEVQSSGSLKFSSMRNENV
LEFPSLRKGMHQSLKIQAYLENLSNFPKVMQNYPVHVTDEMMELYLELLCQYERNSVCKF
LESLESYRVEHCLRLCLEHGITDAAAFLYERVGDVGSALSLLLSTLNDKFILLDASIEKE
LCGARLKHFNNLLETKEVNDILEMVHCSISLCQRNSPRLDPYESECLWFELLDSFCEPLI
DSYNDKVEYEGDKSVGISVNSMGNQKDEGACRIKWKVSKSHQNAEVVRRLLSFFIKEIVE
GMIGYVRLPTIMLKLLSENGSQEFGDFKLTIMGMLGTYDFERRILDTAKSLIEDDTYYTM
SLLKRGASHGYAPRSLTCCVCNCLLSRSCSIQIFSCGHAMHLHCELPENGTSVGCPICMP
RKNCQRSRSKSMSSENGLVSKTLKSQQGHGHANALHLHDNDFLEGHHPVSRFEVLSNLQK
KHVEEMPKLRLAPPALYHEKVNKRIEFQTGERSSKVEKASRNRQLRDIKVKGSAIRFPLK
SNIFASINLFPSQARRRLLSVASIN
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggagctcgatctcgactccatcctccattcacatgctcacactttctccgac
gacgatgatgatcactttatccctcatcgaactgtcgacgaaatcctactcaaccactcc
tcctcttcttctgcttcgccttctcctcctccttctccgtccacttcggttagatgccag
gaacactccgacggcagttcactctctccttcttccgaagccctaagattacagcattcg
cagtctctctcttcggaattgaatccctctgcttcaattattagtcgaataaagtccgat
gatttctcttctttgcctccgtttctctctggggttatcagatcaaacgctaagcctggg
gctgctctggcagctgctgctgctgcgtcgcgctccattccaacgcctcacgctgccgcc
attaggagagctggctccagctctgcaaccgtgcgaaaggttttcaagcacagccgagat
ttggtttcttcagccgccagtgatgctgccgaggttgcctcctctagcagtgctggcact
gttgagggcttagtggccactgatgatatatttacccctggcagttctaatatattggat
aatttccaattccctaaattgcaaagaactgaccgggcagattcaagtggggaactttcg
ttgccagataaaactcaggagagtttgagcgaaacaagtggagtattggctaaagcggat
gctgatttagtatctaaggtaggtaattccggccaatcttcctccactaccccagttgaa
accagcattgactccgccataagtagtaaaaggtgtttagatgttgatgggaattctgta
caatcagagttactggagagaaaatatgataacggtcaacatttaccagcaaatgaagac
aataccgttcatactgaaaccatcaccacagtagaggatattctcccgtcctctgtttct
ggctgtgaagtcagttctgacgaggagataagcccaacagttcctgaaatggaactggag
aatgtggtacctgatactgggaatcgtgaggttctttcaggagaggataacagtagttct
aagaatgaagctgcagatattttggaagagcaagtaatgcaagaggatggtaagagggat
agtataaagacaggaaagaaatccctgccttccttaagacctattgaattagctgaagaa
cttgaaaagaagcagacatttgcaggaatgcactgggaagagggtgctgctgcccaacct
atgaggcttgagggagttcgtaggggatctactgccttgggttactttgacataagtgct
gaaaatactcttactcacaacttctcctcaccaactttcaggcaagatcatggttccccg
caggttttgacagttcatctcaactacatagcagttggaatgtcaaaaggactggttatc
attgtgcccagcagatatacacctcatcaagttgacaacatggatgcaaagatgttgatg
ctgagtttacatggggaaagggctcatatccctgtaacttccttgtgctttaatcatcaa
ggggacttactctttgcaggatatggtgatgggcaatatacggtgtgggatgtgcaaagg
gcctctgcagctaaagttgtgactgaacataaagctccagtagttcacctcttttttctg
ggtcaggattctcgtcagtttaatgtgatcagtggagatagtaagggcatagtcaaattg
attcgcttttcaatagttccctggctcaataggatttcattttctaaatccatgaagctg
ctagatgaaacaacaagcaccgtagtctgtgcttctccattactctctggtgatagtctt
ggaactgctctaacaccttctctagacagcaattcagtgcctggtggtagtgttggtagt
atgatgggaggcatggttggtggagatactgggtggaaactctttgatggatcttctctg
agtgaggaaggagtggttgtatttgtcacacatcagtctgctctagtggctaaagtgagt
cctaatgtagaggtttatgctcaacttcccagaccagatggtgttagggagggttgcatg
ccctatgcggcttggaaatgtgtgcctgggatgcacaattcttcaaatgaaaatgtgcct
gttgaatcatcacataaagtttcactgcttgcaattgcatgggatcataaaattcaagtt
gctaagttggtaaagtcagacctaaaagttctctgggagtggaccctggataattcagca
gttggagtggcatggttggatgatcagatgttggtaattctcacgtcaactggacagctc
tgtttgtttgaaaaagatggaaatttgatccaccagacaagtttctctacagatgggcct
tgtggagatgatctcatttcatatcatacatactttagtaatgcccatgggaaccctgag
aaagctcatcacaactgtatagctgttaggggggccaatgtatacattctaggaacattg
cagcttgttgtctcccgcctcctcccttggaaggaacgcatagaagttttgcgaaaagca
ggtgactggatgggtgcactgaacatggcaatgacactttatgatggtcaagcacatggt
gtaattgacctccctagaaatttaagtgatgttcagaagactgttatgccatatcttgtt
gagttactattgtcatatgtagaagaggtattttcatacttatctgtagcattcagcaac
caaagtgggaagttatgccattcagatgagtcaaatgatagaagccatcttatgcatcct
gaaattaaggagcagtatgcacgggtcggtggtgttgctgttgaattctgtctccatatc
aagaaaactgatgtcctctttgatgaaatatggaaaagatttgataatgaaaaacaacaa
gatacattcttggagcttttggagccttacatattgaaagatatgctcggttccctgcca
ccagagattatgcaagtgctagtggaacattacagcaacaaaggttggttgcagcgagtt
gaacaatgtgttctccacatggacatttcatcattggatttcaatcaggttgttcgcata
tgcagggaacacatgttgtatggagcactaatatacttgttcaacaaaggtcttggtgat
ttcaaggcacccctagaggagcttttttcaattataaggaatagcaaaggagagactgct
gcgccatttgggtacaagatgcttgtttacctgaaatactgtttccagggtcttgctttt
cctcctgggcatggaactctctctactaaaatcctgccatctcttagaaaagagcttgtg
caatttctgttagaagactcttgcttgccgaattcattggcaatttcaagctttccagcc
aatgggccacatccaaacctgctttatctattacagctggatactgaagctacattagat
attctgcaatgtgcatttgtagaagatgttccacaattggaccatatttctgatgattca
gccaattcatacactgaatcagctgaagtaaatggtttgtctgacagtcaaaacttggtc
caagaactagtagatgtcttagctgcaattcttgatgcaagtttcttccaaagtagcaac
tcttgtagcagtggtgatgatagatccattgatatctggccttcaaagagagagagagat
catattttggacttcattgcttactatgtttcttgggaaagggctaaagtctcaaaaagt
accctaagtcagattcttgaatacttgacttcagagattgattcctcagataatgcatct
gagaatgatgaaacctcgaagagaagacaaaaacaacttgttacacttcttgaagtattg
ccagagcatgaatgggatgctccttacttgttacatttatgtgagaaggttcagtttcaa
caggtttgcggcttcattcattctatcagacatcagtatcttgctgctttggatagttat
ataaaagatgttgatgatccaattcattccttctcatttattcatgacatgctgcaacaa
ctgggcaacaaagattctgatgctttccggtctgcagtcatctctcgaattcctgatctg
gtcaaattaagccgggaagatactttctttatggttattagccattttggagaaaaattc
caacacattttgtctgagctacgctctcatccaaaaagcctctttctttacctaaagaca
ctcactgaggttcaatcaagtggtagcctcaaattttcttccatgagaaatgaaaatgtt
ttagaatttccttctctaagaaagggaatgcatcagtcactaaagattcaagcctacctg
gaaaatctgtctaactttccaaaagttatgcaaaactatccagttcatgtgactgacgaa
atgatggagttatatcttgagcttttgtgtcagtatgaacgtaactcagtttgcaaattc
ttggagagtcttgaaagctatagggtggaacactgtttacgtttgtgcctggaacatggc
attacagatgcagctgctttcttgtatgaaagggttggcgacgttggaagtgcactttcc
ctgttactttctacccttaatgataagttcattctacttgatgcatccattgagaaggag
ctttgtggtgctcgtttgaagcattttaataatcttttagagacaaaagaggtcaatgac
atacttgaaatggtgcactgctctatctcgctgtgccagcggaatagccccaggcttgat
ccttacgagtctgaatgcctttggtttgagttgcttgattcgttttgtgaacctttaata
gattcatataatgataaagtggaatatgagggagataagagtgttggaatttcagtcaat
tcaatgggaaatcaaaaggatgaaggggcttgcagaatcaagtggaaagtctcaaagtcc
catcagaatgctgaagttgttaggagattgctctcattctttattaaagagattgttgag
ggaatgattggatatgttcgcttaccaacaatcatgttaaaactgctttctgaaaatggt
agccaggaatttggagattttaaacttaccatcatggggatgcttggaacctacgatttt
gaaagaagaattttggacactgccaaatccttgattgaggatgatacgtactataccatg
agcttacttaagaggggggcttctcatggttatgctcctcggagccttacatgttgtgtt
tgcaattgccttctatccagaagttgtagcattcaaattttcagttgtggtcatgcaatg
catctgcactgtgaacttccagaaaatggtacgtcggttggatgtccaatttgtatgcct
agaaagaattgtcagaggtcaagaagcaaatccatgtcatcagagaatggattagtgagc
aagactttgaaatctcagcaaggacatgggcacgcaaatgctttacatctacatgataat
gattttcttgaaggacaccaccctgtttcaaggtttgaggtcttgagtaatcttcagaaa
aagcatgtagaagaaatgcctaagttgaggctagcaccacctgctctttaccacgaaaag
gtaaacaaaaggatagaattccaaacaggagaaaggtcatcgaaagtggaaaaagcaagc
aggaacagacagttgagggacataaaagtgaagggatcagcaataaggttccccctgaaa
tcaaatatatttgcatccataaacttgttcccttcccaggcaaggagaagattgttaagc
gtagctagcattaattga
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