KEGG   Ipomoea nil (Japanese morning glory): 109174970
Entry
109174970         CDS       T04663                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03020  RNA polymerase
ini03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109174970
  09124 Replication and repair
   03420 Nucleotide excision repair
    109174970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109174970
   03019 Messenger RNA biogenesis [BR:ini03019]
    109174970
   03400 DNA repair and recombination proteins [BR:ini03400]
    109174970
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109174970
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109174970
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109174970
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 109174970
NCBI-ProteinID: XP_019179764
LinkDB
Position
Un
AA seq 177 aa
MFFHIVLERKMQLHPRHFGRDLRDKLVSKLMKDVEGTCSGRHGFIVAITGIENVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtgttggaacggaaaatgcaactccaccctcgccactttggccgt
gacctccgcgacaaactcgtatccaagctcatgaaagatgtcgagggaacttgcagtgga
cgacacggtttcatagtagcaatcactggcattgagaatgtcggaaaaggtctcattcgc
gacggtacagggttcgtcactttcccagtgaagtatcagtgtgttgtgtttcggcctttc
aaaggggagattctagaagctgttgttactatggtgaacaagatgggtttctttgccgaa
gcagggcctgtacaaatttttgtctctaatcatttaataccagatgacatggagtttcag
tctggagatgcaccaaactacacaacatctgatggatcggttaaaattcagaaggatagt
gaagtacgactaaagatcattggaactcgtgttgatgctacagaaattttctgcattggt
acaattaaggatgatttcttgggtgttatcaatgatcccggagcagctgtctga

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