Ipomoea nil (Japanese morning glory): 109174977
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Entry
109174977 CDS
T04663
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109174977
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
90S particles
Other 90S particles
109174977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109174977
NCBI-ProteinID:
XP_019179770
LinkDB
All DBs
Position
Un
AA seq
510 aa
AA seq
DB search
MKKKKNFSAPSQKKKRFSDPFFESEGGDNKRRRKFAGDDDIESSDDDEAYLSGGEGGGEE
DEEDNEVEETAAEKKKRLADAYLEKIRAIASRDEEDTQSGDEIDREEIEGKRDSLVAKIL
QQEQLEESGRTRRAIASRIQAPEPGEGFRVLLKHRQAVTAVALSEDDLKGFSASKDGTIV
SWDVQSGKKEKYSWPSDEVLKSHGAKDPQGRASKHSKHVLALAISTDGRYMASGGMDRHV
HLWDVRTREHIQTFPGHKGPVSCLTFRQGSSELFSGSFDRSVKIWNVEDRAYVNTLFGHQ
AEVLTIDSLRKERVLTVGRDRTMHLFKVPEESQFIFRASASSLECCCFINNDEFLSGSSE
GSIEHWTAKKKKPIHIVKNAHTSLIEQRSTGMLSNGDIEASNCAGHVALNPESVSSSALS
WVSSVAVCRSSDLAASGAGNGLIRLWKLEGESKGICPLFELPLAGFVNSLAFAKSGRFLV
AGVGKEPRLGRWGRIANAQNGVAIHSFKHT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagaagaatttttcagctccttctcaaaagaagaagagattttctgatccg
tttttcgagtcggaaggaggcgacaacaagcgccgccgcaagtttgccggcgacgatgat
atagagagcagcgatgacgacgaggcatacttgtccggaggcgaaggaggaggggaggaa
gatgaagaggataacgaagttgaggaaaccgcggccgagaagaagaagcggctggcggat
gcgtacttggaaaagatcagggctatagccagtagggatgaggaagacacacagagtggg
gacgagatagatagagaggagattgaaggaaagagagattctttggttgccaagattttg
cagcaggagcagcttgaagagagcggccgcacccgaagagccattgcttctagaattcag
gcaccagaacctggagaaggatttcgagttttactaaaacatcgccaagcagttactgcc
gtggctctatccgaagatgacttaaaggggttttccgcatccaaggatggcactatagtt
agctgggatgtacagagtgggaagaaagagaagtattcttggcctagtgatgaagttttg
aagtctcacggagcaaaggatccacaaggtcgagcatcgaagcatagtaaacatgttcta
gcattggctatcagcactgatggcaggtatatggcaagtgggggcatggatcgtcatgtt
catttatgggatgttcgaacacgagagcatattcagacttttcctggccataaaggacct
gtttcatgcttaacattcaggcaaggaagttcagaactgttttcagggtcatttgatcga
tcggtcaagatctggaatgtggaggatagagcttatgtaaacacactatttgggcaccaa
gctgaagtcctaacaattgattcattgcggaaagagcgagttttgacagttggtcgtgac
agaaccatgcacttatttaaggttcctgaggaatcacaatttatatttcgtgcttctgct
tcttccctagaatgctgttgtttcatcaataatgatgaattcttatcaggttctagtgaa
ggaagtatagaacattggactgcaaagaagaagaaacccattcacattgtgaaaaatgca
cacacttcacttattgagcagagaagtacaggaatgctgtcaaatggtgacatagaagca
tcaaattgtgcaggacatgttgccttaaatcctgagagtgtctcttcatctgcactctcc
tgggtcagttcagtggctgtctgcagaagcagtgatcttgctgcctcaggagcaggcaat
ggtctaattcgtctttggaaacttgagggtgaatccaagggaatctgtcctttgtttgag
cttccattggctggatttgtaaattctttagcttttgcaaaatctggacgcttccttgtt
gccggagttggaaaggagcctcgcttaggaaggtggggtcgtatcgctaatgctcagaat
ggagttgctatacattctttcaagcacacgtga
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