Ipomoea nil (Japanese morning glory): 109175541 Help Entry 109175541         CDS       T04663                                  Name (RefSeq) uncharacterized LOC109175541   KO K18730   PERQ amino acid-rich with GYF domain-containing protein Organism ini  Ipomoea nil (Japanese morning glory) Brite KEGG Orthology (KO) [BR:ini00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109175541 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      109175541    Surveillance factors     Other surveillance factors      109175541 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  GYF Motif Other DBs NCBI-GeneID:  109175541 NCBI-ProteinID:  XP_019180353 LinkDB All DBs Position Un AA seq 1556 aa AA seqDB search MADGKLDLPDDLLSSRSSDQTWIPKGSDVDKSLTGLLDLSKDQAVPDSSIPLSPQWLYAK PSDTKTEMRTPSSLSLGSSADPSQKEAWRTDAPEDKKDWRRTTTENESRRWREEERETGL LARRDRRKPDRRAVENASAKETTENRALPTTDRWHDGGNRNAGLEARRDSKWSSRWGPEE KEKEARTEKKVDTEKEDANSDNQTFVASRAVSERDPDARDKWRPRHRLEGSTAVPGSYRT APGFGIERGRAEGSYVGFVIGRGRSSTSIQRPSGGTIGAALSENDKSVLGKPFIAANTFS YPRGKLLDIYRRQRIDSSFGNVYEKMEEAPPITQETVIEPLSFVVPDHEEEAILNDMWTG KITSSGAFYNCYNKGRSTDNIAEIEEMESSNGKVSALPTGTKEKMADIITNVSKDVRELA VDYSADTNLHEIEAKNRVPDVAGDDIISTLIRDEYKSRSIDISRSQFEDSELTPSYRAKS TAASDISSKLSNDSNSLFGMPSSAQFLGSNTNENQLTRGVPPEELSMFYRDPQGEIQGPF LGVDIISWFEQGFFGTDLPVRLVDAPEDSPFEELGDVMPHLRVGHCYGGVLDPSSKLEQP ATSEGALVADIQDSLSVSVVDSSTTREGLIWQQSDFDGPYPHHIQSKLTNHDFLQSEKSF SKGDDFNDFVAQDEEIVFPGRPGSGGNLIGKASRTSNDPSSIINGSSIPNELSEHGMAVQ RDNKLHPFGLLWSELEGPFARNGSRAGQDQLLNPIAGRVSSFGTTNESTVAGEARPDIYK KNVLSDPNLYQSAMDARHLSRMDQESNHYDLADKLLSQQLQQQHLQPHSLMSPHNVHLND AMMERVGTQNSIHSPHLAGQMGQDLEQFIALQAQQQRQLQFQQLQQQQQYHQQQMLLKEQ QQTQAREQLLFEQILRNQMLDSNHGQSHVDAMIANSAREQAFMKQKILSELQPLPQLPTR QAEPSIEHLIQARFGQMPHPEHRNDLLELLSRAKHGPMHPLEHQIIQREQLHGRQMSLGM RQRLEMEEDRQTSFWPINETGQFHRNPGVAHRTSSGVGPLDLFQKQQIMSPEDHIGLLER NLALQDRRPQRGFYDPGLLPFERSMSLPGGGGGGVNMDVVNTMARAQGLHVQDPNMQMHS GGNMGGFSSGVYHRSLVPNAFHGSHSDSMEGQWSEINGQMPTDWIESHIQRLHLTGERQM KESEMKRSSDDSSLWMSAGGNDESSRRLLMELLHQKSDQLSTHRPENFVGTSYERGPASA HIKGTNTVNYSFNSVSDQEMGLSQSLVGPFSSNSGVQPKSFLAEEIAGLNTAENFSFRSH SGSLFEEPLLSGINEINKGSQLETRGQVKLAGSATIDQGEIPVSVLRRNTSLDTGVGNAG MYSDGNSTGGAMAEDVKKDCASAATSRCPENILLKRPPVMRVLSNQEGLSELNIDNVRGR SPSNEVEKRDGGGNAANQVSDTFATGKKEVGFRRTASCGDAEVTETSFSDMLKSNAKKPP QEVHSSTAASESFDAAQVARRNKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED NT seq 4671 nt NT seq  +upstreamnt  +downstreamnt atggctgatggaaagctcgatctccctgacgatctcctctcgtccagatcgtccgatcag acttggattccaaaaggtagtgatgtggacaagtcattgacaggattgcttgatttgtct aaggatcaagcagtgcctgatagcagcattcctttgtctccacagtggctctatgctaaa ccaagtgacactaagacagaaatgcgtacaccaagttcattgtcccttggaagttctgct gatccaagtcagaaggaggcctggcgtacagatgcacctgaggataaaaaggattggaga aggactacaacagagaatgagagtcgtcgttggcgtgaggaagagagggaaactggtttg cttgcccgaagagatcgtaggaaaccagatcgtcgtgctgttgagaatgcttctgccaaa gaaacaactgaaaatagagctttgcctactactgacagatggcatgatggtggtaatcgc aatgcaggtcttgaagcaaggcgtgatagcaagtggtcttctagatggggtcccgaagaa aaagagaaggaagctcggacagagaaaaaggttgacactgagaaggaggatgctaatagt gacaatcaaactttcgttgctagccgtgctgtttcagaacgggacccagatgcccgtgat aagtggcgaccacgccacaggctggagggaagtactgcagtccctggttcatatcgtact gctcctggatttgggattgagagaggacgtgcagagggttcatatgtggggtttgtcata gggcgtggcagatctagcacgtctattcaaagaccatcaggtggtacaattggtgctgca ctgtctgagaatgataaaagtgttcttggaaaaccattcattgcagccaatacctttagc tatccgaggggaaaactgcttgatatatatcgcaggcaaaggattgactcttcttttggt aacgtttatgagaaaatggaagaagcaccccccatcacacaagaaactgtcattgagccg ttatcttttgttgttcctgatcatgaagaggaggccattcttaatgatatgtggactgga aaaatcacaagtagtggggcattttataattgttataacaagggaagatcaactgataac attgcagaaattgaagaaatggaatcttccaatggcaaagtgtcagccctgcctactggt acaaaggaaaagatggcagatatcattactaacgtatcaaaagatgttcgagaattggct gttgactacagtgctgatacaaatttgcatgaaatagaagccaaaaacagagttcctgat gttgctggagatgatattatatcaaccttgataagagatgagtataaaagcagatcaata gatattagcaggtctcaatttgaggattctgaactcactccttcatatcgtgccaaatca actgctgcttctgacatcagttctaagctttctaatgattcaaattccctttttggcatg ccatcttctgcgcaattcctgggaagtaacactaatgaaaaccaattaacgaggggcgtt ccacctgaggagttaagtatgttctatcgtgatcctcaaggtgagatccagggcccattt ctcggcgttgacataatctcttggttcgaacaaggattttttggaacagatttgccagtt cgcttggtagatgccccagaagattcaccttttgaagaattgggtgatgttatgccacac ttaagagttggacattgttatggtggtgtccttgatccaagttctaaattagagcaacct gcaacatctgagggagcattggtagctgatatacaagattctttgtctgtttctgttgtt gattcttcaactacccgtgagggcttgatctggcaacaatcggattttgatggtccttat ccccaccatattcagtcaaaattaactaatcatgactttcttcagtcagaaaaatcattt tccaagggtgatgacttcaatgattttgttgcccaagatgaagaaattgttttcccaggg aggcctggaagtggcggtaatcttattggcaaagcgtcaaggaccagtaatgatccttca agtattataaatggttcttcaattcctaatgaattgtctgagcatggaatggcagttcag agggataacaagttgcatccatttggtctgctatggtctgagcttgaaggcccttttgca aggaatggtagtagagctggtcaggatcagcttctaaaccccattgctggaagggtttcc tcatttggcacaacgaatgaatcaactgttgctggggaggcaaggcctgatatttacaaa aagaatgtactgtctgacccaaacctttatcaaagtgccatggatgctcgacatttgtca cggatggaccaagagtcaaaccactatgatttggctgataagctgctgtctcaacagctc caacagcagcatcttcagccacatagtctgatgtctcctcataatgtccacttgaatgat gcaatgatggaaagagtagggactcagaattcaatacacagtccacatcttgctggccaa atggggcaagatctggaacagttcattgcccttcaagcccaacagcaaaggcaactgcaa tttcaacaactgcagcagcaacaacagtaccatcagcagcaaatgcttctaaaagaacag caacaaactcaggctagagagcagctgctttttgaacaaatattgcggaatcaaatgctt gattccaaccatggtcaatcacatgttgatgctatgatagccaatagtgctcgtgaacag gctttcatgaagcagaaaattttaagtgagctacaaccgctcccccagctgccaacaagg caagctgagccttccattgagcatcttattcaagcaaggtttggtcaaatgccacatcca gagcatcgaaatgatttgttggagctcttatccagagcaaagcatggaccgatgcatcca ttggagcatcagatcattcagcgcgaacagctgcatggtaggcagatgtctttgggaatg aggcaacggttggaaatggaggaagacaggcaaacttctttttggccaattaatgaaact ggtcagtttcatagaaatcctggtgttgctcatcgaaccagctctggagttgggccatta gatctttttcaaaagcaacagataatgtctcctgaagatcacattggtctcctagagcgg aatcttgcattacaagatagaaggcctcagcgtgggttttatgatccagggttattgcca tttgagcgatcaatgtcattgcctggaggaggtggtggtggagttaatatggatgttgta aatacaatggcacgtgcacagggtttacacgttcaggaccctaatatgcaaatgcactct ggtggtaacatgggtgggttctcttctggtgtctaccatcggtcattggttcccaatgca tttcatggttcccactcagattcaatggagggccaatggtctgaaatcaatggtcagatg ccaactgattggatagagtcccacattcagcgattgcatcttactggtgagaggcaaatg aaggagtcagagatgaaaaggagttctgatgattcaagtttatggatgtctgccggagga aatgatgaaagttcaaggcgtttgcttatggaactgcttcaccagaaatctgatcaattg tcaacacaccgtccagaaaattttgttggaacctcctatgaaagaggtccagcttcagca cacattaaagggaccaatactgtaaattattccttcaattctgtgtctgatcaagaaatg gggctaagccaatccctcgtagggccttttagctctaattcaggtgtgcaaccaaaaagc tttcttgcagaagagattgctggtcttaatactgctgaaaatttttcctttagatctcat tctggatcattatttgaagaacctctcctctctggcataaatgaaatcaacaagggctct caattagagactcgaggtcaggttaagctagctggttcggcaactatagatcaaggggaa atcccggttagtgttctgagaaggaatacttcactcgacactggagttggaaatgcaggc atgtacagtgatggcaatagtactggtggtgccatggcagaggatgttaaaaaggattgt gcatctgctgctacatcaagatgtccagaaaacattttgttaaaacgtccacctgttatg cgggttttatcgaatcaagaaggtttgtctgagctgaacattgacaatgtcagagggaga agtccttctaatgaagtggaaaaacgggatggaggaggtaatgctgcaaatcaagtctct gatacttttgccactgggaaaaaagaagtgggtttccgccgaactgcttcttgtggtgat gctgaagttacagagacatccttcagtgacatgcttaagagtaatgcaaagaagcccccc caggaggttcattcctcaacagctgcttccgagtcatttgatgcagcccaggtcgctcga cgcaacaaaaagaaaggaaagaaagggagacagattgacccagctcttcttggattcaag gttacgagcaatcgcataatgatgggtgagatacagcgcatagaggactag

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