Ipomoea nil (Japanese morning glory): 109175596
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Entry
109175596 CDS
T04663
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109175596
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109175596
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SSDB
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
DinB
DinB_2
Motif
Other DBs
NCBI-GeneID:
109175596
NCBI-ProteinID:
XP_019180428
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All DBs
Position
Un
AA seq
455 aa
AA seq
DB search
MEGFNKNNCLLLLVVCVGAIIPATVGHIAEYDEVWRRREAEAIEHAQQAYEPNPHNISAS
LIHEVRRTLSEAVAEAEAEAEDVTRNDTTRHLLGSKKYHGPCNATNPIDRCWRCHADWAT
NRKRLADCALGFGYKTKGGKLGNFYTVTDNADDPSNPKPGTLRHAVIQKKPLWIIFSHDM
DIKLHQELIMQGDKTIDGRGAQVHISDGAGITIQFVKNVIIHGIHIHHIFEGNGGLIRDG
LDHFGLRTKSDGDGISIFGSSNVWIDHVSMRNCYDGLIDAIEASTAITISNGHFTDHNDV
MLFGANDLSTKDKIMQITLAFNHFGKRLIQRMPRCRYGYIHVVNNDYTHWNMYAIGGSSH
PTIICQGNRFIAPPDIHKKEITKRVKGTPEEWKTWTWRSQGDIYMEGAFFVQSGDPNFMD
KHHKLYDGVMTFKAEDVTWLTRFAGALNCRVGSPC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggagggatttaacaaaaataattgtttgttgttgttggtggtttgtgttggcgctata
atccccgcaacggttggtcacattgctgagtacgatgaggtgtggcggaggcgagaagct
gaagccatagaacatgcccaacaggcttatgagcccaatccacataacatttcagcatcc
ttgattcacgaagttcgaaggacactatcagaagcagtagctgaggctgaggctgaggct
gaggatgtgacgaggaacgacacaactcggcatcttctgggttcaaaaaagtatcatggg
ccgtgtaatgcgacaaacccgatcgatcgttgctggcgatgccacgccgattgggctacc
aaccggaagaggttggctgattgcgccttggggtttgggtacaaaactaaaggcggcaag
ttgggcaacttctacaccgttactgacaacgccgatgatccatctaaccccaaacccgga
accctccgacacgcggtcatccaaaagaaacccttgtggataatcttttcacacgacatg
gacatcaagctccaccaggagttgatcatgcaaggtgataagacgatcgatgggcgtggg
gcccaagtccacatcagcgatggcgccggtataaccattcagttcgtgaagaacgtgatc
atccacgggatccacatccaccacatcttcgaaggtaacggcggcctgatacgagacggc
ctggaccactttggactgcgaaccaagagcgacggcgacggcatctccatctttggttct
tccaatgtttggatagaccatgtgtcgatgaggaactgttacgacgggcttattgatgcg
atcgaagcatccacggccatcacaatttcgaatggtcacttcacggatcataatgatgtg
atgctgttcggtgcaaatgatttgtccacaaaagacaagatcatgcaaatcacgcttgca
ttcaaccacttcgggaagagattgattcagaggatgcccagatgtcggtacggatacatt
catgtggtcaacaacgattatacacactggaacatgtacgccattggagggagttctcac
cccaccatcatttgtcagggaaaccgattcattgctcctccagacatacacaaaaaagag
ataactaaaagagttaaggggactccggaagaatggaagacgtggacatggagatcacag
ggagatatatacatggagggagctttctttgttcagtctggggatccaaatttcatggac
aagcaccacaaattgtacgatggggtaatgacattcaaggctgaggatgtgacttggctt
actaggttcgcaggggcacttaattgcagagtaggatctccctgttag
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