Ipomoea nil (Japanese morning glory): 109175633
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Entry
109175633 CDS
T04663
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109175633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109175633
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
SR proteins
109175633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
DUF2457
Motif
Other DBs
NCBI-GeneID:
109175633
NCBI-ProteinID:
XP_019180480
LinkDB
All DBs
Position
Un
AA seq
270 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIKEREVEDLFYKYGRILDIELKIPPRPPCYCFVEFENALDAED
AIRGRDGYNFDGCRLRVELAHGGRGPPSSSDRRGGGYGGGGGGGGGGGGRHGVSRHSEYR
VIVRGLPDSASWQDLKDHMRKAGDVCFAEVANDSEGTFGLVDYTNYEDMKYAIRKLDDSE
FKNPWTRTYIRVREHKHGSSRSRSRSRSRSRSPRRRRSSKSADRSRSRSPPPRSRSASPI
KSSRPISRSRSGSRPRSGSASPHQARANSG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgattttctcgcacaatctatgtgggaaaccttcctgcagatatcaaagaa
cgggaagttgaagatttgttctataagtatgggcgtattctggatattgaattgaagatt
ccccctcgcccaccatgctattgttttgttgagtttgagaatgctctagatgcagaagat
gctatcaggggccgagatggctacaactttgatggctgtcgattgagggttgagcttgct
catggtggtagaggtccaccatcttcaagtgatcgtcgtggtggtggctatggtggtggt
ggaggtggaggtggtggaggtggagggcgtcatggcgtttctcgtcattctgagtatcgg
gttattgtgcgtggtcttccagattctgcttcctggcaagatttgaaagaccacatgcga
aaagctggtgatgtgtgctttgctgaagttgccaatgacagtgaaggaacctttggcctg
gttgattatacaaattatgaggatatgaaatatgctattcggaaacttgatgatagtgag
ttcaaaaatccttggaccaggacttatatccgggtgagagaacacaagcatggttcatca
agaagccgaagccgaagccgaagcagaagcaggagtcctaggaggaggaggagcagcaaa
tcagcagacagatctaggtcaagatcaccacctccacggtcaagatctgcatcaccgatc
aagtcatcacgacctatttctaggtcaagatcaggatcaaggccaagatcagggtcagca
tctccccatcaggcccgcgccaacagtggctaa
DBGET
integrated database retrieval system
