Ipomoea nil (Japanese morning glory): 109175678 Help Entry 109175678         CDS       T04663                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03040   Spliceosome ini04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109175678   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     109175678  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ini03041]     109175678    04121 Ubiquitin system [BR:ini04121]     109175678    03400 DNA repair and recombination proteins [BR:ini03400]     109175678 Enzymes [BR:ini01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      109175678 Spliceosome [BR:ini03041]  Complex B   Other components    Prp19 complex     109175678  Complex C    Prp19-CDC5 complex     109175678 Ubiquitin system [BR:ini04121]  Ubiquitin ligases (E3)   U-box type E3    109175678 DNA repair and recombination proteins [BR:ini03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     109175678 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_EIPR1 U-box Beta-prop_SPT8 Beta-prop_DCAF4 zf-Nse PROPPIN WD40_like KNTC1_N PUMA_CC PAS_11 Motif Other DBs NCBI-GeneID:  109175678 NCBI-ProteinID:  XP_019180544 LinkDB All DBs Position Un AA seq 524 aa AA seqDB search MNCSISGEVPEEPVVSTKSGLLFEKRLIERHISDYGKCPVTGEPLTMDDIVPIKTGKIVK PRPVQAASIPGMLGMFQIEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARELLAQADRQLPSAAAMESADNATTLSNGKRAAEDVEMDPGGKRIRPGISSAIIT ELTDCNTTLSQQRKKRQVPPTLAPLDTLERYTQLNSYPLHKTNKPGILSLDIYYPKDIIA TGGVDTNAVVFDQPSGQIISTLSGHSKRVTSVKFAGESEVVVTGSADKTVRVWQGSEDGS YACRHVLKDHTAEVQAVTVHATNNYFVTASLDNTWCFYELASGLCLTQIGDSSESDGYTS AAFHPDGLILGTGTTGAIVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAQDGV KLWDLRKLRNFRNFSPYDENTPTQTVEFDHSGSYLALGGSDIRVHQVASVKSDWNSIKTF PDLSGTGKATCLKFGPDAKYIAVGSMDRNLRIFGLPGDDAQPED NT seq 1575 nt NT seq  +upstreamnt  +downstreamnt atgaactgctcaatttctggcgaggtgccggaggagccggttgtctccacgaagtccggt ttgctcttcgagaagcgtttaattgaacgacacatctcggattatggtaaatgtccagtt actggagagcctctgacaatggatgatattgtcccaatcaaaacaggaaagatcgtgaaa ccccgacctgtacaggctgcaagtattcctgggatgttgggaatgtttcagattgaatgg gatagtttgatgctatcaaattttgcactggagcaacaattacatactgcaagacaagag ttaagccatgcactctaccagcatgatgctgcttgccgtgtgattgcaaggttgaagaag gaaagggatgaggcaagggaattgcttgcccaggctgacagacaactacccagtgcagca gccatggaaagtgccgataatgctactaccttaagcaatgggaaaagagctgctgaagat gtggagatggatcccggaggcaagagaattcgtcctgggatttcatcagctattattaca gagcttacagattgtaataccaccctttcacagcaaaggaaaaagcgacaggttcccccg acattggctcctttggatactctggagagatacacccagctgaatagttaccctcttcac aaaaccaacaaaccagggatactctctttggacatctattaccctaaggacatcattgca actggtggagttgacactaatgctgttgtctttgaccaaccttcaggacagattatatct acactaagtggtcactcgaagagggttaccagtgtcaaatttgctggtgaaagtgaagtg gtggttactggttctgctgataagactgttcgtgtatggcaaggatcagaagatggaagc tatgcttgtagacatgttttgaaagatcacactgcagaggtgcaagctgtcactgtccat gcaaccaataactattttgtgactgcttctcttgataatacttggtgcttttatgaactt gcttcaggtttatgccttactcagattggagattcttcagaatctgatggctatacatct gcagcctttcatcctgatggtctgattcttggaactggaacaactggggctattgtgaag atttgggatgttaagagtcaggcaaatgttgcacgatttgatggccatgttggagctgtt actgccatctccttttctgaaaatggttatttcttggcaactgcagctcaagatggtgtc aagctctgggatttacggaagttgaggaatttcagaaacttctctccttatgatgaaaat acaccaacccaaacagttgaatttgaccacagcggaagttaccttgcattgggaggctca gatataagggtccatcaagttgctagtgtaaagtcagactggaacagcatcaaaacattc cccgacttgtcaggaacaggtaaagccacgtgtctaaaattcggtccagacgccaaatac atagctgttggatcgatggatcgaaacctcagaatattcggcttgcccggggatgatgct cagccagaagattaa

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