Ipomoea nil (Japanese morning glory): 109175691
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Entry
109175691 CDS
T04663
Name
(RefSeq) tRNA pseudouridine synthase A 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ini03016
]
109175691
Enzymes [BR:
ini01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
109175691
Transfer RNA biogenesis [BR:
ini03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109175691
Prokaryotic type
109175691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
109175691
NCBI-ProteinID:
XP_019180562
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MSFSAAVGLASLPNLVEAASSPSIPQNLGCGESQHHHPTDLHFPTLALPSHKWRLLISYD
GTRFSGWQYQPSIPTVQCALEQALTQITKLDRKDLNLVGAGRTDAGVHALGQVAHFLTPF
NYDTLDGIHKALNGLLPKDVRVREIGPAAPEFHARFSVVSKIYEYKIYNDAIMDPFQRLY
AYHSIYKLNADAMRDAAKHFIGKHDFSAFANAARNERVRDPVKTISRFDVIETGPLLQLE
VEGSGFLYRQVRNMVAVLLQVGREAVPPDIVPKILESRDRKQLAKYALSVPPHGLCLKAI
SYKEEHLHLPVGSPVTSFGMHHSIKTCKLPCF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcggcagctgtcgggctcgcttcacttccaaatctcgttgaagctgcttct
tctccttcaattccgcagaatttgggctgcggagagagtcaacatcatcacccaaccgac
cttcatttcccaactcttgctcttccttctcacaagtggcgcttactcatttcctatgat
ggaacccgattttcaggttggcaatatcaaccatcaataccgacagtgcagtgcgctttg
gaacaggctttaactcaaattacaaagctagaccgcaaagatcttaacctagttggggca
gggagaacggatgcaggagttcatgccttgggtcaggtagcgcactttcttacgcctttt
aactatgacaccctggatggcatccacaaggcactaaatggtctgcttcctaaagatgtt
agagtccgggaaattggccctgcagcccctgaattccatgctcgtttttctgtcgttagt
aagatttatgagtacaagatctataatgacgccattatggaccccttccagaggctctat
gcttaccacagtatttataaacttaatgccgacgccatgagagatgctgcaaagcatttc
ataggtaagcatgacttctcagccttcgccaatgcagcacggaatgaacgggtgcgagat
ccagtgaagaccatctcccgctttgatgtgattgaaacagggccattattgcagcttgaa
gttgaagggtctggttttctttatcgacaagttcgaaacatggtggcggtgttgcttcaa
gtgggaagggaagcagttccacccgatatcgttcccaagattttggaatctcgcgataga
aagcaacttgcaaagtatgcattgtcggttccaccccatggtctctgtcttaaggctatc
agttataaagaagaacatctacaccttccagtaggtagcccagtaactagttttgggatg
catcatagcataaaaacatgcaagcttccatgtttttga
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