Ipomoea nil (Japanese morning glory): 109175790
Help
Entry
109175790 CDS
T04663
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109175790
09123 Folding, sorting and degradation
03018 RNA degradation
109175790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109175790
03041 Spliceosome [BR:
ini03041
]
109175790
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109175790
mRNA degradation factors
5'-3' decay
Lsm complex
109175790
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109175790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
bHLH_SAC51
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
109175790
NCBI-ProteinID:
XP_019180690
LinkDB
All DBs
Position
Un
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLNLVLDEAIEYLRDSDDPLKT
TDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFLQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaggaaagaaacagttctagatttggcaaagttcgttgacaagggtgtgcaa
gtaaagcttactggtggcagacaagttgtgggaacactaaaaggctatgaccaattgctg
aatcttgtcttggatgaagccattgagtatcttagagattccgatgatcctctgaagaca
acagatcagacacggcgtcttggattaattgtctgtagggggactgcagttatgcttgtg
gcgccaactgacggcacagatgagattgccaatccttttctccagccagatggagcatag
DBGET
integrated database retrieval system