KEGG   Ipomoea nil (Japanese morning glory): 109175795
Entry
109175795         CDS       T04663                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03020  RNA polymerase
ini03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109175795
  09124 Replication and repair
   03420 Nucleotide excision repair
    109175795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109175795
   03400 DNA repair and recombination proteins [BR:ini03400]
    109175795
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109175795
  RNA polymerase III system
   RNA polymerase III
     109175795
  RNA polymerase I system
   RNA polymerase I
     109175795
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109175795
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 DUF3557
Other DBs
NCBI-GeneID: 109175795
NCBI-ProteinID: XP_019180695
LinkDB
Position
Un
AA seq 206 aa
MPLSEEEITRLFRIRKTVMQMLTDRGYMVTDYEIGMPKHQFISKYGENMKREDIVIQKAL
RSDNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISTK
FHLEVFQEAELLVNIKEHELVPEHQLLTPEEKKTLLERYTVKETQLPRIQVTDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgcctctttcggaagaggagattacaagattattcaggatccgaaagacagtgatgcaa
atgctgaccgacaggggctacatggtgacagactatgagataggaatgccaaagcatcag
ttcatttcgaaatatggggagaacatgaaaagagaggacattgtaattcaaaaggcatta
cgcagtgataattctgatcagatatatgttttcttccctgaggaggcaaaggttggtgtt
aagacaatgaaaacttacacaaatcgcatgaaatcagagaatgtttttcgggcaatatta
gttgtccaacagaatttaactccctttgctcgaacatgcataagtgaaatatctacaaag
ttccacttggaggttttccaggaggcagagttgttagtcaacataaaagaacatgaactt
gttcctgagcaccagctgctcactccagaggaaaagaagaccttgctggagagatatact
gtcaaagaaacacagctccctcgtattcaggtgactgatccagtggccagatactatggg
ctaaagcgtggacaagttgtgaaaataatcagaccgagtgagactgcagggcggtatgtc
acttatcgatatgttgtttga

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