Ipomoea nil (Japanese morning glory): 109175826
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Entry
109175826 CDS
T04663
Name
(RefSeq) RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
ini03015
mRNA surveillance pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109175826
09122 Translation
03013 Nucleocytoplasmic transport
109175826
03015 mRNA surveillance pathway
109175826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109175826
03041 Spliceosome [BR:
ini03041
]
109175826
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109175826
Spliceosome [BR:
ini03041
]
Complex C
Other components
EJC/TREX
109175826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
109175826
NCBI-ProteinID:
XP_019180731
LinkDB
All DBs
Position
Un
AA seq
194 aa
AA seq
DB search
MANAAEVEAVDFEPEEDDLMDEDVDASSSPRAPIPRIKSAIGDSSSAPKKTKGRGFREDA
AEADRNARMSARFDSLDSDGGPGPERSIEGWIVLVTGVHEEAQEDDIHNSFGEFGDIKNL
HLNLDRRTGFVKGYALVEYENFEEAQKAINEMDGTELLTQIIHVDWAFSKGSFKRRNARR
SPRGHRSRSPRRRY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcggcggaggtggaggcggtggacttcgagccggaggaggacgatctgatg
gacgaggatgtcgacgcctcctcatcccctagggctccaattccgaggatcaaatccgct
atcggcgactcttcctccgctcccaagaagactaagggccgcggcttccgcgaagacgct
gccgaggctgaccggaatgctcgtatgtctgctcgcttcgactctctggactctgacggt
ggccccggtcctgaacgatccattgaaggatggattgttttggtaactggagttcatgaa
gaggctcaagaagatgatatccataactcttttggtgagtttggagatattaagaacttg
catctgaatctagatcgccgcactgggtttgtcaagggttatgctctggttgaatatgag
aactttgaagaagcacagaaagctataaatgagatggatggaactgaactgctcactcaa
atcattcatgttgattgggcatttagcaaaggttcattcaagaggaggaatgcaaggaga
tcacctcgaggtcatcgttcaagaagtccaaggaggagatactag
DBGET
integrated database retrieval system
