Ipomoea nil (Japanese morning glory): 109175940
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Entry
109175940 CDS
T04663
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109175940
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109175940
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SSDB
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109175940
NCBI-ProteinID:
XP_019180871
LinkDB
All DBs
Position
Un
AA seq
454 aa
AA seq
DB search
MAGFNINCFCMFLVTFAIILPSISGHIAEWDEVWQQRKIEAWEHALKTFEPDPSNVSAAF
NDEVHKTLLESKNEPDRKKFVNGSDDTRRQLAHRKPYNGPCNATNPIDRCWRCQPNWANN
RRRLADCGMGFGRKAIGGKHGVLYVVNDHSDDPSNPKPGTLRHAVIQKKPLWIIFSRDMN
IRLNQELIMQSDKTIDGRGFQVHVSGGAGITLQFIKNVIIHGIRVHDIVQGSGGMIRDGV
DHYGLRTRSDGDGISIFGSSDVWVDHVSMRNCYDGLIDAIEASTAITISNGHFTDHNDVM
LFGANDFSPKDKIMQITIAFNHFGKRLVQRMPRCRFGYIHVVNNDYTHWNMYAIGGSSDP
TIISQGNRFIAPPDIHKKEITHRVKGTPQEWMQWTWRSQGDIYMSGAFFVQSGDPNFMSK
HHQLYDGIQPFKAEDVTWLTRFAGALNCRIGSPC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccgggtttaatatcaattgtttttgcatgtttctggttactttcgccataatactc
cccagcatctcgggtcacatcgctgagtgggacgaggtatggcagcagcgtaaaatagaa
gcctgggagcacgccctcaaaacattcgagcccgatccttctaatgttagtgctgcattc
aacgacgaagttcataagacattgttggaatccaagaatgaaccagacagaaagaagttc
gttaacggatcagatgacacaaggaggcagctagcgcatcgtaagccttacaatggaccg
tgtaatgccacaaatcctatcgaccgttgctggcgttgccagcccaactgggctaacaat
cggaggagattggccgattgcggaatggggtttgggcgtaaagccataggcggcaagcac
ggcgttttgtacgtggttaatgaccactctgatgatccttcgaatcccaaacctggaact
ctccgacatgcggtcatccaaaagaaacctttgtggataatcttttcacgagacatgaac
atcaggcttaaccaagagctgataatgcaaagcgacaagaccatcgatgggcgtgggttc
caagttcacgtcagtggtggggccgggatcaccctccaatttatcaagaacgtcatcatc
catggcatacgtgtccacgacatcgtccaaggtagcggtggcatgatcagagacggcgtt
gaccactatggactgcgaaccaggagcgacggagacggtatttccatctttggttcttcg
gatgtttgggtagatcatgtgtccatgaggaactgttacgacggcttaattgacgccatt
gaagcatccaccgccatcactatttcaaatggccacttcaccgaccacaatgatgtgatg
ttgtttggtgcaaatgatttttccccaaaagacaagatcatgcaaatcaccattgctttc
aaccacttcgggaagagattggttcagaggatgcccagatgtcggttcggatacatccat
gtggtcaacaatgattacacacattggaacatgtatgccattggaggtagttctgacccc
actatcattagtcaaggcaacaggttcatcgctcctccagacattcacaaaaaagagata
actcacagagtgaaggggactccacaggaatggatgcagtggacatggagatcacaggga
gatatatacatgtctggagctttctttgttcagtctggggatccaaatttcatgtcaaag
caccatcaattgtatgatggtatacagccatttaaagcggaggatgtgacttggcttact
aggtttgcaggggcactaaattgcaggataggatcaccctgttag
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