Ipomoea nil (Japanese morning glory): 109176064
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Entry
109176064 CDS
T04663
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ini01009
]
109176064
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109176064
Enzymes [BR:
ini01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109176064
Protein phosphatases and associated proteins [BR:
ini01009
]
HAD phosphatases
Fcp/Scp phosphatases
109176064
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109176064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
109176064
NCBI-ProteinID:
XP_019181033
LinkDB
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Position
Un
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AA seq
1273 aa
AA seq
DB search
MFVATDSIPIGCRKVYKERTLDFSMEEECNTAGRAVGDVEEGEISDSASVEEISEEAFIK
QLDTPPSSVSTTSTTTSTSSTSTAKVNPNANVSSDPNPKTARVWTMRDLYNNYPISRGYA
RGLYNLAWAQAVQNKPLDELFVMKKAETDASVNGESKKDGTVEDSFNHKVVIDVEDDVKE
EGELEEGEIDLDSEVVENGDFKEVNSEAMAMAVDEMGNKVNFIREGLRSVTVVEAEKYFV
EVCSRLQRLLDSLHEIVSENSLSEKDALIELFLTAIRTTITVFCSMKQSEKEKHKDHLSR
VLVGASNKKPLLFSVQQSNEVGKLILSLDLPSVPLKTEDEDSEMRLVQEGNVNDSDISDT
DAFQGPAFVKRQDLESVSAKFIESNLSIESSRLGVANSKPKGLSRPLLDLHKDHDVDSLP
SPTRESKPSFPIDKAGVLKPEFPLPRGALQTGNSVTHPYETDALKAVSSYQQKFSRSSFF
MVDSLPSPTPSEDGDKGDTDIGEEISSSITPNCNYLNASGPRQPVVSSLPNMNPVGGQEL
SNVNSAGSIGVVATPVSRSSPVKIKDPRLRALNSDAPAQSFNPCLVPVSNTETRMTGFGE
MVGSRKQKAVDDLVVGGPSMKRQRSEQTDSVIVSDIPSYTGTGGLLGGRGDGGFPITNSN
LVLKSIKDASKLEQVATAVTTTTTVPSVPINAIENLSATNASVAATLQSLLKDIVVNPSI
WMNRIKMEQLKSMEPSKVTTQPLSSSNCISGGILPVNIAPSKASVPDPRQGGILQATPPM
AIPKDDLGKVRMKPRDPRRAFHNPPIQKGDQSTTGVPNTQGITCSSSVQRQQEQLDMKSA
LPNSSVPPDISHQFTKNLKNIADLISVSQPSISSPLASQTPSTQPVLVHQGKLEGKRVVL
ESSQPLASEVASVVPSRPQNSWGDVEHLFEGFDDQQKAAIQRERARRIEEQKKMFAARKL
CLVLDLDHTLLNSAKFIEVDPVHEEILRKKEELDREKPQRHLFRFPHMGMWTKLRPGIWN
FLEKASKLFELHLYTMGNKLYATEMAKLLDPKGDYFAGRVISRGDDADLIDGDERVPKSK
DLEGVLGMESAVVIVDDSVRVWPHNKLNLIAVERYIYFPCSRRQFGLPGPSLLEIDHDER
PEDGTLASSLAVIERIHQIFFAHPSLDEADVRNILATEQRKILAGCRILFSRVFPVGEAN
PHLHPLWQSAEQFGAVCTNQIDDKVTHVVANSLGTDKVNWAFSTGRFVVHPGWVEASTLL
YRRANEIDFAIKQ
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagctaccgattcgattccaattgggtgtagaaaggtatataaggaaagaacc
ctagatttttccatggaagaggaatgtaatacggcgggtagagcggttggagacgtggag
gaaggcgagatctcggattcggcctcggtggaggagatctccgaggaggcttttattaag
cagctagacactccgccttcttctgtttctactactagtactactacttctacttcttct
acttcaactgccaaggtaaatccgaatgccaatgtttcgagtgacccgaacccgaaaacg
gctagggtatggacgatgagagatctgtataataactatccaatatcgaggggttacgct
aggggtttatataatctcgcttgggctcaagcggttcaaaataagcctttggacgagctt
ttcgtgatgaagaaggctgagacggatgcttcggtgaacggggagagtaagaaggatggc
actgtggaggattcttttaaccacaaggttgtgatcgacgtcgaagacgatgttaaagag
gaaggggagttggaggaaggtgagatcgatttggattcggaggttgttgaaaatggggat
ttcaaggaggttaattctgaggccatggccatggccgtggatgaaatggggaataaggtt
aatttcattagggaaggacttcggagtgtgactgtagtagaagcagagaaatacttcgtt
gaagtctgctccagattgcaaagattgttggatagtttgcatgaaattgtttctgaaaat
tcattatcagagaaagatgctttgattgaactgtttttgactgcaattcgaactactatc
accgtgttctgctctatgaaacagagtgagaaagagaaacacaaagatcacttatccaga
gtgcttgttggtgcaagtaacaaaaagccactgcttttttccgtgcagcagtccaacgag
gtgggcaagctgattctttctttagatcttccgtcagttcccttgaaaactgaagatgag
gactcagagatgagattggttcaagagggtaatgtgaatgattcagatatatctgatact
gatgcctttcaaggcccagcatttgtaaagagacaggatttagaatctgtatctgcaaaa
tttattgagtccaacctgtcaatagaatcttcaaggcttggggtggctaattccaaacct
aaagggttatcacgtcccttgctagaccttcataaggaccatgatgtagatagtcttcca
tcccctacacgagaaagtaagccaagttttcctattgataaggctggagtattgaagcct
gagttccccttaccaagaggagctcttcagacaggaaactctgtcacgcatccttacgaa
acagatgcccttaaagctgtttcctcctatcaacaaaaatttagccgtagttcatttttc
atggtggacagtcttccgagtccaaccccctccgaagatggtgataaaggggacactgac
attggtgaagaaatttccagttctatcaccccaaattgcaattatttgaatgcatcaggt
cctagacaacctgttgtttcttctctgcccaacatgaatccagttggtggacaagaattg
agcaatgttaacagtgctggttctattggtgtagttgcaactcctgtatcaaggagttct
ccagtaaaaatcaaagatccaaggcttcgagccttaaatagtgatgcacctgctcaaagt
tttaacccatgtctcgtgcctgtttctaacactgaaactagaatgacaggttttggggaa
atggtgggttcaagaaagcagaaggcagttgatgacctagttgttggtggtccatcaatg
aaaagacaaagaagtgagcagacagactctgttatagtcagtgatattccatcttatact
ggaacaggtggtttgttagggggtagaggggatggtggatttccaatcacaaatagtaat
cttgtgttgaagtccataaaggatgctagtaaattggaacaagtagcaactgctgtcact
actactaccactgtgccaagtgtcccaattaatgctattgagaatttatcagcaacaaat
gccagtgtagcagctaccttgcaatctctactcaaagacattgtagtaaatccatcgata
tggatgaatagaattaagatggaacaactaaagtctatggagccctccaaagtcacaaca
caacctttaagctcttctaattgtattagcggaggtattctaccggtgaatatagctcct
tccaaagcgtctgtacctgaccccaggcaaggaggaatacttcaggctactcctccgatg
gctattccaaaggatgacctgggaaaagtccgcatgaaaccgcgtgaccctcgccgtgct
tttcataatcccccaattcagaagggtgaccaatccactacaggtgtaccaaacactcaa
ggaattacttgcagctcaagtgttcaaaggcagcaggaacagttggatatgaagtcagca
ttacccaattcctctgtgccacctgatatttctcaccaatttactaagaacttgaaaaat
attgctgaccttatctctgtttctcaaccgtctatatcctcacctttagcttctcaaact
ccttcaacacaaccagtacttgttcatcaaggtaaattggaagggaagagggttgttttg
gagtcaagccaacccttagcatctgaagtggcttctgtagtcccttctcgacctcaaaac
agttggggagatgttgagcatctctttgaaggttttgatgaccagcagaaagctgctata
cagagagaaagagcaagaaggatagaggaacagaagaaaatgtttgcagcaaggaagctc
tgtcttgtcttggatctggaccatactttactgaattcagctaagtttattgaagtagac
ccagtacatgaggaaattttgagaaagaaagaagaattggaccgtgagaagcctcagagg
catctctttagatttccacatatgggaatgtggacaaagttacgacctgggatctggaat
tttttggaaaaggctagtaagctttttgagctacatctttacacgatgggaaacaaactt
tatgccacggaaatggcaaaattgcttgatccaaaaggtgattattttgctggaagagtt
atttccagaggtgatgatgcagatctcattgatggcgatgaaagggttcctaaaagcaag
gacctggagggggttttgggtatggaatcggctgttgtgattgttgatgactctgtgaga
gtttggcctcataacaaactaaatctgatagctgtggaaaggtatatttactttccttgc
agtaggcgccagtttggccttccaggcccctctcttcttgagattgatcatgatgagaga
cccgaagatgggactttggcctcttctttggcggtcatcgagagaatccatcagatcttt
tttgctcatccatcattggatgaagctgacgttaggaacatcttagcaacagaacaaagg
aagattcttgctggttgtcgtattcttttcagcagggtatttcctgttggagaagctaat
cctcacttgcatccattatggcagtctgctgaacagtttggtgctgtgtgcaccaatcag
atagatgataaggttacccatgtagttgccaattctcttgggactgataaggttaactgg
gctttttctaccgggcgatttgttgtgcatcctggatgggtggaggcttcaactttgctt
tatcgaagagcaaacgaaattgattttgcaattaaacaataa
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