Ipomoea nil (Japanese morning glory): 109176128
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Entry
109176128 CDS
T04663
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109176128
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109176128
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
Helicases
109176128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
AAA_22
NTPase_I-T
Motif
Other DBs
NCBI-GeneID:
109176128
NCBI-ProteinID:
XP_019181106
LinkDB
All DBs
Position
Un
AA seq
795 aa
AA seq
DB search
MASQPSNSKKKQKKSKKRAREDSELLEHLDSLPWNSSLPENDDAFSHLFGDDDLGGGFLS
LEEVDETTYGLEIPKSSGGNEEPKSKGKPKTKKQKISESYDDSNGEEGDDKADEEIKQKK
KKRSKKKKGSLVNKTEENTELTAVSNNKNDDEEDSVDETEFYAWSEMRLHPLLMKSIYRL
NFKEPTPIQRACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEKEKADRRIEENG
EVDEKIAPRGLLRALIVTPTRELALQVTDHIREVAKHTNIRVIAIVGGMSTEKQERLLKR
RPEIVVGTPGRLWELMSSGEVHLVELHSLSFFVLDEADRMIETGHFQELQSIVDMLPMAS
RSTDGHSMETQNCITVSSVQRKKRQTFVFSATISLSADFRKKLKRGSQISKSNDELNSIE
NLSERAGMRADAAIVDLTNASIMANKLMESFIECREEDKDGYLYYILSVHGKGRTIVFCT
SVAALRHLASMLRILGINVSTLHAQMQQRARLKGIDRFRSNENGILIATDVAARGLDIPG
VRTVVHYQLPHSAEVYVHRSGRTARAFSDGCSIALISPNDASKFASLCKSFAKESFQRFP
VEISYMPEVMKRLSLARQIDKILRKDSQDKANKTWLERHAESVELELENDDSEEERVNNF
KQKRATSSQLKNLQQELKSLLSLPLQPTTFSNRFLAGAGVSPLLQNQLEELAKLKQGKIS
NTVDGQRRKLVVIGQDCVEPLQALRSAGPEVHLDLKEIAEKRKNIDNIRRKRKEAKKRQR
EQRRKQRKKSKGAND
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaccttcgaatagcaagaagaagcagaaaaaatctaaaaagcgagcccga
gaggactctgaactactcgagcatctcgactcacttccatggaattcttcgctccctgaa
aacgatgacgcattctcccatctcttcggtgacgatgacctcggaggaggatttttatcg
ctggaggaggttgatgaaacaacatacggattggagattccaaagtcgagtggaggaaat
gaggagccaaaatccaaaggaaagccaaaaacaaaaaagcagaaaattagtgaaagttat
gatgattccaatggtgaggagggagatgataaagctgatgaggaaataaaacaaaagaaa
aagaaaagaagtaagaagaagaagggtagcctggtgaataaaacagaagaaaatacagaa
ttaacagctgtttccaacaacaaaaatgatgatgaagaggattcagtagatgagactgaa
ttttatgcatggagtgaaatgagacttcatcccctgcttatgaaatcaatatacagactg
aatttcaaggaacccacaccaatacagagagcttgtattcctgcagctgctcatcaagga
aaggatgttgtaggtgctgcagagactggatctggaaaaacacttgcatttggtttaccc
attcttcagcgccttcttgaagagaaagaaaaagctgacagacgtattgaagaaaatggg
gaggtagatgaaaaaatagctcctagaggtcttcttcgggctctaattgttactcctaca
agagagcttgcacttcaggtcactgatcacatcagggaagtagcaaaacacaccaatatt
agggtcattgctattgttggtggcatgtctactgaaaagcaagagagactattgaaaaga
agacctgaaattgtggtcgggactcctgggaggctctgggaacttatgtcaagtggagaa
gttcatcttgtagagctacattcattatcattctttgtgctggatgaggctgatcgcatg
atagaaactgggcattttcaagagttgcagtccatagttgacatgcttcccatggctagt
agatcaactgatggacattctatggaaacacagaattgcataacagtttcaagtgtccaa
agaaagaaaaggcagacttttgtcttttctgcaactatttccctatctgccgattttcgg
aagaagctgaagcgtggatcacaaatttcaaagtctaatgatgagttgaattcaattgaa
aatctttcagagagagcaggaatgcgagcagatgctgctattgttgacctaacaaatgca
tcaataatggcaaacaagcttatggagtcattcattgagtgcagggaagaagataaagat
ggatatttatattatatcttgagtgttcatgggaaagggcgcacaattgttttctgtaca
tctgttgcagcattacgccatcttgcctcaatgttgcgcatccttggcatcaatgtttcg
acacttcatgcccagatgcaacagcgggcacgactaaagggaatcgatcgttttcgctcg
aatgaaaatggcatacttattgctactgacgtcgcagccagaggccttgatattcccggt
gttcgaactgttgttcattaccagcttccacattcagctgaggtttacgttcatagaagt
ggaagaactgccagagctttctctgatgggtgtagtattgccctaatctctccaaatgat
gcatcaaagtttgcttccctatgcaaatcctttgctaaggaaagcttccagcgttttcct
gtagagatatcatacatgccggaggtcatgaaacgattatcccttgcacgccaaatagac
aaaattcttaggaaagactctcaggataaggccaataaaacttggcttgaacgacatgct
gaatcagttgagttggaattggagaatgatgatagtgaggaggaaagggtaaacaatttt
aaacaaaagagagccacttcttctcaattaaagaacctgcagcaggaactgaagtctctt
ctttctctcccattacaacccacgacattttcaaatcgctttttggcaggggctggggtt
tctcctctcctgcagaaccaattagaggaactagctaagctgaaacaaggcaaaataagt
aatactgtagacggtcaaaggaggaaactggtggttattgggcaagattgtgtggaacct
ctccaggcacttcgaagtgctggtccagaggtacatctggatttgaaggagattgcagaa
aagcggaaaaacatagacaacataaggagaaagagaaaagaagcgaaaaaacgtcagcgt
gagcaacgtcgaaagcagaggaaaaagtctaaaggtgcaaacgactga
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