Ipomoea nil (Japanese morning glory): 109176153
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Entry
109176153 CDS
T04663
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109176153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109176153
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109176153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NAD_binding_2
Motif
Other DBs
NCBI-GeneID:
109176153
NCBI-ProteinID:
XP_019181141
LinkDB
All DBs
Position
Un
AA seq
437 aa
AA seq
DB search
MDSDQGKLFIGGISWETDEDKLKDYFQHYGEVIQTVVMRDKVSGKPRGFGFVVFADPTVL
DNVLQDRHTIDGRTVEAKRALSREEQQSSKAGNVNSGGVSGGGGGSNNKTKKIFVGGLPP
TLTEDEFRQYFETYGNVTDVVIMYDQQTNRPRGFGFISFDSEDAVDRVLHKTFHDLNDKQ
VEVKRAFPKDANPNASGRQGYGGSGNSPYGNKMDSNRYMASQNTGGGYPSYGTPGYGYPP
TGGMGYGGYGSYGGANPGYGSANTGYGGLSSSPYGNPNAPNSGGYGSGPRSSWSSQSPSG
YGNVGYGSAPWGNSNAASGGGAAAGGQSLTGVAGYGNQGYGYSGFGGNDGAYGNSSAYGS
IGRVGGAPRTSSPIGGGGATGELQYGNAGGNSGYGSAGWRPDIPQASGNYGSNGSHGGQV
GYGSGYSGIPGRQSQQQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatcaaggaaagctttttatcggtgggatatcatgggagacggacgaggat
aagttgaaggattacttccagcattacggcgaggtgatccagactgtagtgatgagagac
aaggtttccggcaagcccagaggctttggctttgtcgtctttgcagatcccactgttctt
gacaacgttctccaggataggcacaccattgacggccgtacggttgaggcgaaacgggcg
ttatcaagagaggaacaacagagctcaaaagctgggaatgttaatagcggcggtgtttct
ggtggtggtggtggtagcaataataagaccaagaaaatatttgtcggggggttgcctcct
accctcactgaggatgagttccgccagtattttgaaacttatggtaatgtgacagatgta
gttattatgtatgatcagcagacgaaccgacctcgagggtttggttttatttcgttcgat
tctgaagatgcagtggacagggttttgcacaagacctttcatgatctaaacgacaagcaa
gtagaggtaaaacgtgcttttcccaaagatgcgaaccctaacgctagtggccgccagggg
tatggtggttctggtaacagcccttatggtaataaaatggattccaacaggtacatggca
tcgcaaaacactggaggagggtatccctcctacggtacacctggttatggatatccacct
accggtggcatgggttatggtggttatggaagctatggcggtgccaatcctggttatggg
agtgcaaatactgggtatggaggcctttccagttctccgtatggaaatcctaatgctccc
aatagtggtggctatggaagtggcccaagaagctcgtggagctctcagagtccctctggg
tatgggaatgtcggctatggaagtgccccctggggtaattccaatgccgcttctggtggc
ggagctgctgcggggggtcaatcactgacgggagtggcgggatatggcaaccaaggctat
ggttatagtgggtttggtggaaatgacggggcttatggaaattcgtctgcttatgggtct
atcggacgtgttggtggtgctccaagaacaagttcaccgattggcggtggtggtgctaca
ggagagttacaatatggcaatgcgggtggaaattctggatatggaagtgcaggctggaga
cccgatataccacaagcttctggcaattatggctcgaatggatcccatggcggccaggtt
gggtatggaagcggctatagtggtatcccagggcggcaatctcaacagcagtaa
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