Ipomoea nil (Japanese morning glory): 109176536
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Entry
109176536 CDS
T04663
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109176536
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109176536
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
CDC37_N
Motif
Other DBs
NCBI-GeneID:
109176536
NCBI-ProteinID:
XP_019181545
LinkDB
All DBs
Position
Un
AA seq
448 aa
AA seq
DB search
MAVSKNCVNLSLTSLLLLLFVVGIVARVQKTEMSESRTVEEEELQRSYNSTMAARLAEVE
EALSKHAVDDPEEVVSMVVETIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKNRKRLA
DCGIGFGRNAIGGRDGRFYVVTDAGDDDPVNPKPGTLRHAVIQEEPLWIVFKRDMVIQLK
QELIMNSFKTIDARGSNVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYG
WRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHLAHHNEVMLLGH
SDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINS
QGNRYLAPANSFAKEVTKRVETSESEWKGWNWRSEGDLMLNGAYFTPSGAGASASYARAS
SLGAKSSSMVGTMTANAGPLGCRRGRTC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcgaagaactgcgttaacttgagtctgacttctttgttgcttctcttgttc
gttgtcggcattgtcgctagagtccagaaaactgaaatgtctgagtccagaactgtggag
gaagaggagttgcagagatcgtataactcgacaatggcggccaggttggccgaggtggag
gaagctttgagcaagcatgcagtggatgacccagaagaggttgtctccatggttgtagag
accatcagaaacagcactgagaggcgaaaactgggttatttttcatgtgggactggtaat
ccaattgatgattgctggcgttgtgatcccaattggcaaaagaaccgcaagagacttgct
gattgtggcattggatttgggcgcaatgccattggtgggcgtgatggtcgattctacgtt
gtcactgatgctggtgatgatgatcctgtgaaccccaagcctggcactcttcgccacgct
gttatccaggaggagcccttgtggattgtgttcaagcgtgacatggttatacagttgaag
caagagctgatcatgaacagcttcaagaccattgatgcccgtggatccaacgtccacatt
gctaatggggcgtgcatcacaatccaattcgttaccaatgtcatcatacatggactgcac
attcatgactgcaaacccactggaaatgccatggtcaggagctcaccgtctcattatggt
tggaggactatggctgatggtgacgccgtctctatctttggctcaagccatatctggatt
gatcacaattctctaagtcactgtgctgatggccttgttgacgctgtcatgggctcaacc
gccatcactatctctaacaatcacctcgcccaccacaacgaggtgatgctattgggtcac
agtgactcctatacaagagataagcaaatgcaagtgaccatcgcttataaccactttggg
gaaggtctcattcagagaatgccaaggtgcaggcatggatacttccatgtggtgaacaat
gactacactcactgggagatgtatgccatcggtggaagtgctagccccaccataaacagc
caaggcaacagatatctggctccagccaacagttttgccaaggaggtgacaaaaagggtt
gaaacatcagagagcgaatggaagggttggaattggagatcggagggcgacttgatgctg
aatggagcctatttcactccatctggagccggggcttcagccagctatgcaagagcttca
agcttaggtgccaagtcctcttctatggtaggcaccatgactgcaaatgctggccctcta
ggttgccgccgtggccgcacctgttag
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