Ipomoea nil (Japanese morning glory): 109177195
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Entry
109177195 CDS
T04663
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109177195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109177195
Membrane trafficking [BR:
ini04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109177195
Hops complex
109177195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
zf_RING_Vps8
zf-RING_Vps41
RPN1_RPN2_N
zf-RING_UBOX
zf-C3HC4
Nup54_57_C
zf-RING_2
GST_N_2
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109177195
NCBI-ProteinID:
XP_019182051
LinkDB
All DBs
Position
Un
AA seq
990 aa
AA seq
DB search
MESKRQVFSVDLLERYATKGRGVITCMAAGNDVIVLGTSKGWVIRHDFGVGDSDDIDLSA
GRPGEQSIHKVFVDPGGSHCIATVVGNGGADTYYMHAKWAKPRVLSKLKGLLVNAVAWNR
QQITEASTKEVILGTESGQLYEIYVDAKDKMEKHIKLLFELKELPETFMGLQMETAIVNN
GTRYYVMAVTPTRLYSFTGIGSLESVFASYVDRTVHFMELPGDIPNSELHFFIMQRRAVH
FAWLSGAGIYHGDLNFGGHHSSPGGGENFVENKALLDYSKLSEGAEVVKPSSMAVSEFHF
LLLIGNKVKIVNRISKQIVEELVFDQTPDAVSRGISGLCSDASAGLFYAYDQNSIFQVSV
NDEGREMWKVYLDLKEYAAALASCHDHLQRDQVYFEQAESAFSSKDFQRAAYFYAKITYV
LSFEEITLKFISIGEQDALRTFLLRKLDSLAKDDKCQITMICTWATELYLDKINRLLLED
DGASETHSSEYQDIIMEFRAFLSDSKDVLDEATTMKLLESYGRVDELVFFAGLKEQYEIV
VHHYIQQGEAKKALQVLQKPNISIDLQYKFAPDLIMLDAYETVESWMTTKNLNPRKLIPA
MMRYSSEPHAMNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKKEDESALLRFLQCKF
GRGRPGGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD
KVEDDEDLRKKLWLMIAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICSSLEDYNEQIEKLKQEMNDATQGADNIRNDINALAQRYAVIDRDEECGGCG
RKILNVGGDFRMARGYAAVGPMAPFYVFPCGHAFHSQCLIAHVTRCTTPTQAEYILDLQK
QLTLLGSEPRKESNGALSEDQPIASLTPIEKIRSQLDDAIASECPYCGDLMIREISLPFI
VTEEVQEVASWEIKPHNPGSQPQRSLSLSA
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaaagcggcaggtgttctctgtggatcttctcgaacgatatgccacaaagggg
cgtggagtgattacctgtatggctgccggaaacgatgtcatcgttttgggtactagcaaa
ggatgggtgatcagacacgattttggagtcggcgattctgacgatattgatctttctgct
ggtagacccggggagcaatctattcataaagtttttgttgatcctggtggtagtcactgc
attgccacagttgttggcaatggaggtgctgatacatattacatgcatgcaaaatgggct
aaacctcgtgttttaagcaaattgaaagggcttcttgtcaacgctgttgcttggaaccgg
cagcaaataacagaagcttcaacaaaggaagtcattcttggcacggagagtggccaactg
tatgagatatatgtggatgcaaaggataagatggagaagcacataaagttgctatttgaa
ctcaaggaactacctgagactttcatgggtttgcagatggaaacagctattgtaaacaat
ggaactagatattatgtgatggctgttactcccacacgcctatattcttttactgggatt
gggtcgctagagtctgtttttgctagttatgtggaccgcacagtacatttcatggagctt
cctggtgacatacctaacagtgaacttcacttctttataatgcaaaggagagctgtgcat
tttgcctggctttcaggagctggaatctaccatggtgacctaaactttggcggacatcat
agttcaccaggtgggggtgaaaactttgtggaaaacaaagctcttttggactattcaaaa
ttatcagaaggagctgaagttgttaaacctagttctatggcagtatctgaatttcatttt
cttcttcttattgggaacaaagttaagattgtaaacaggattagtaagcagatagtagaa
gaacttgtttttgatcaaacacctgatgcagtttcaaggggaatcagtgggttatgcagt
gatgcgtctgctggactgttctatgcatatgaccaaaactctatcttccaggtgtctgtt
aatgatgaaggccgagaaatgtggaaggtatacttggacttaaaggaatatgctgcagca
ttggctagttgtcatgatcacctgcagagggatcaagtctattttgagcaggctgaatct
gctttttcttcaaaggatttccaacgagcagcttatttttatgcaaaaattacgtatgtg
ttgtcattcgaagagataacattgaagtttattagtataggtgaacaggatgctttgaga
accttccttttaaggaaactcgacagtcttgctaaggatgacaagtgtcaaataactatg
atttgtacatgggcaactgaactgtatttggacaagataaatcggctacttttagaagat
gacggtgcttcagagactcacagttcagagtatcaagatattattatggagtttcgtgct
tttctaagtgacagcaaggacgtattggatgaagcaacaactatgaagctacttgaaagc
tatggtagagtcgatgaattggtcttttttgctggcctgaaggagcaatatgagattgtt
gttcatcattatattcagcaaggagaagcaaagaaagccctgcaagttcttcagaagcct
aatatctcaatagatcttcagtacaagtttgctccagaccttatcatgcttgatgcatat
gaaactgttgagtcatggatgactactaaaaatttgaacccgagaaaactcattcctgcc
atgatgcgttattcaagtgagccacatgcaatgaatgaaacccatgaagttataaaatat
ctggagtattgtgtgcaccgactgcagaatgaggatcctggtgttcataacctgctactt
tcattatatgcaaaaaaggaggatgagagtgctctcctgcgcttcctgcaatgcaagttt
gggaggggtcggccaggtggccctgaatttttttatgaccccaaatatgccttgcgcctt
tgcctcaaggaaaagcggatgcgcgcttgtgttcatatctatagcatgatgtctatgcat
gaagaagcagttgctcttgctttacaggttgatccagagcttgctatggctgaagcagac
aaagttgaagatgatgaagacttgagaaaaaagctttggcttatgattgcaaagcatgtc
attgagcaggaaaaaggaactaagagggagaatatccgaaaggcaatagcatttctcaag
gaaactgatggattattgaagattgaagatatcttacctttctttccagactttgcttta
attgatgatttcaaagaagcaatttgctcatcattagaggactataatgagcaaattgaa
aaattgaagcaggagatgaatgatgcaacacaaggtgccgacaatattagaaatgatatt
aatgctcttgctcaacgatatgctgtcattgatcgtgatgaggaatgtgggggttgcggg
cgaaaaatattaaatgtgggaggtgacttccgaatggctaggggatatgcagcagttgga
ccaatggcccctttctatgtctttccttgcggacacgccttccattcccagtgcctgatt
gcccatgtaactaggtgcaccactccaacacaagccgaatatatactggatctgcagaag
cagcttactttgctgggcagtgaacccaggaaggagtcaaatggtgccttgtctgaagat
caaccaatagctagcttgacccccattgagaagattcggtcacagctagatgatgccatc
gccagtgagtgcccatattgtggtgacttgatgatccgtgaaatctctttacctttcatc
gtgactgaagaagtacaagaagtagcatcatgggaaataaagccacataaccctgggagt
cagcctcagagaagcctatctttatctgcatga
DBGET
integrated database retrieval system
