Ipomoea nil (Japanese morning glory): 109177429
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Entry
109177429 CDS
T04663
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109177429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109177429
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
109177429
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109177429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
109177429
NCBI-ProteinID:
XP_019182357
LinkDB
All DBs
Position
Un
AA seq
407 aa
AA seq
DB search
MKPKTFILLQPQSALLTMKKRNQSYRRSQPQTVPSTPPSPQIFRAIAGKISSSSSSYSSK
KPLSLTLTTQQDTNWVPLNLGRTELYLPLTFPTGQTFRWKQTGPLQFTGVVGGSHLVSLK
QLENGDVGYHLHRTTSVDDDDVALARAALRDFLNVGISLGEIWETFKTSDPRFAELADHL
GGARVLRQDPLECLIQFICSSNNNIKRITLMVDFISSLGNYLGTVEGFKFYEFPTLDRLS
RVSDAELREAGFGYRAKYIIGTVKALQSKPGGGYEWLASLRERDLHEAVDSLCTLPGVGP
KVAACVALFSLDQHHAIPVDTHVWQIATRYLIPELAGTSLTPKLCTRVADAFVNKYGKYA
GWAQTLLFIAELPTQKAVLPSSFQNTKEEKHFEKKRKMGGNQKILNE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaaaacgttcatactgcttcagccacagagtgctctactaaccatgaagaag
aggaaccaatcatacagacggagtcaaccccagacggtaccttccaccccaccaagccca
cagattttccgcgccattgccggaaaaatctcctcctcttcttcttcatactcttccaag
aagcccttgagccttaccctcaccactcaacaagacaccaattgggtgcccttaaacctc
ggcagaaccgagctctacctgcccttgaccttccccacaggccagactttcaggtggaag
cagacgggcccactccagttcaccggggtcgtcggtgggtcccacttggtctccctgaag
caattggagaatggagatgtcggttaccatctccaccgcacaaccagcgtggatgatgat
gatgttgcccttgccagggccgccttgcgtgattttctcaatgtggggatttctcttggt
gagatttgggagacatttaagacctccgatcctagatttgccgagttggccgatcatttg
ggaggggccagagtgctcaggcaggaccctcttgagtgcctaatccagttcatttgctcc
tctaataacaatattaagagaattacattgatggttgatttcatttcgtcattggggaat
tatttgggcactgttgaagggtttaaattttacgaattcccaaccttggaccggctatcg
agggtttctgacgctgagctcagggaggctggttttggttacagggcaaaatatataata
ggtactgtgaaggcattacagtcaaaaccagggggaggttatgaatggcttgcttcactt
cgtgagagagatcttcatgaggctgttgatagtctttgtactctgcctggtgttggtccc
aaggttgcagcctgtgttgctctcttctctttggatcaacaccatgccattcctgttgat
actcatgtctggcagattgcaactaggtacctcatccctgagctggcaggaaccagtttg
acacctaaactttgcactcgcgtagcagatgcctttgtgaacaaatatggaaaatatgct
ggctgggcccaaactcttcttttcattgcggaacttccaacacaaaaagcagtcttgcca
tcatcatttcaaaacaccaaagaagaaaaacattttgaaaagaaaagaaaaatgggtgga
aaccaaaaaatactaaatgaatga
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