Ipomoea nil (Japanese morning glory): 109177614
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Entry
109177614 CDS
T04663
Name
(RefSeq) uncharacterized LOC109177614
KO
K10756
replication factor C subunit 3/5
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03030
DNA replication
ini03410
Base excision repair
ini03420
Nucleotide excision repair
ini03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109177614
03410 Base excision repair
109177614
03420 Nucleotide excision repair
109177614
03430 Mismatch repair
109177614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109177614
03036 Chromosome and associated proteins [BR:
ini03036
]
109177614
03400 DNA repair and recombination proteins [BR:
ini03400
]
109177614
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109177614
DNA Replication Termination Factors
ELG1-RFC complex
109177614
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109177614
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109177614
Check point factors
HRAD17(Rad24)-RFC complex
109177614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
RuvB_N
nSTAND3
AAA_5
DNA_pol3_delta2
Rad17
AAA_16
AAA_18
NPHP3_N
AAA
GvpD_P-loop
TIP49
Mg_chelatase
AAA_33
Resolvase
Motif
Other DBs
NCBI-GeneID:
109177614
NCBI-ProteinID:
XP_019182566
LinkDB
All DBs
Position
Un
AA seq
747 aa
AA seq
DB search
MADINMPRYSKQTQAQISSAMKQRRSGYEPSDAETDWPETPARETTMRNGEEEDTSSSEA
FNLSHRHAAILHLETAASPIKAAPRRPSKSPYRPRAAVDGDVHNTHNTLHRSSNRNVSPF
SKSENRRWAGEGNNVLDTEFFSKSEQRRRNRGNNDFLENGTTVLSPYRKQNNQIKVTEKS
NLSRRTTSAPRGSSYHKYDHKERRKLERITAKNNGPSVGEINEMVGNAGINPMFDSTDSI
SPGDIFFSREYAAFTMQKITFPKTGFDSPVYGAKHNGNNNNLDSLDRTASNSIQGSGRRI
LSSSNVLAHTNSNSSSGVSRQSSNLSGSTTISAKKFTANRQKSHLGEAWFSCIKKGYCRR
SSRESPERRRPVDEALFIEKAFVVESLRQFWADKHRPVSLDGFICHKQEALLLKRLAADE
TLSHILLKGPPGSGKKTLAMALLHEVYGDSISNISHDVRYFRVQETKPVQVVVPVTSSPH
HVELNVHLERNSRYALMALVKNISTEYAAIPEISKANMNMKADHKVLVLYDVDKATQNIQ
HLIKWIMDCYSDSCKLVLCCEDDTTIVESVKNSCKVVKVEAPVTHEVMEVLIQIARKEGL
ELPMSFAAKIAAKSKQNLSQAIMALEACNAHNYPFTEDQPIPLGWELAVLEMAAEILADP
SPKRVFTIRGKLQKLLLEFVHPKLILLKLVEQFLRRIDPSLRREVYYWNAYYEKRLPTGT
SALLKLEEFVAKFMSIYRKSCGSQYAQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatcaatatgccgcggtacagtaagcagacccaggcccagatttcgtctgcg
atgaagcaacggagaagcgggtacgagccgtccgacgcggaaacggattggccggaaact
ccggcccgggagacgacgatgagaaacggcgaggaggaggataccagcagctctgaagct
ttcaatctcagccaccgccacgcggcgattctccacctcgaaacagcggcttcccccatt
aaagctgcaccgagaaggcctagcaagtcaccgtatagaccacgcgccgccgtcgacggt
gatgttcataatacccataatacccttcaccgtagctctaatagaaatgttagccctttt
tctaaatctgagaataggaggtgggcaggggagggtaataatgttcttgatactgaattc
ttttcaaaatctgaacaaagaagaaggaatagagggaataatgattttcttgaaaatgga
actactgttttgagcccttataggaagcagaataatcaaatcaaagttactgagaaatcg
aatcttagccgtagaactacttcggctcctagaggatcatcataccacaaatatgatcac
aaggagagaagaaaattggagaggataacagccaagaacaatggaccttctgttggagaa
atcaatgaaatggtagggaatgccgggatcaatcctatgtttgacagcactgattcaatc
tccccgggcgatattttcttctctcgcgaatatgcagctttcacaatgcagaagattacc
ttccccaagaccggttttgacagccccgtttatggtgcaaagcataacgggaataataat
aatcttgattctctagacagaacagcttccaattccattcagggttctggaaggcggatt
ttgtcatcaagtaatgttcttgcacacacgaattcgaattcgagctctggtgtgagtagg
cagagtagtaatctaagtggaagtacgaccataagtgcgaaaaagttcacagcgaataga
caaaagagtcatctgggagaggcatggttttcttgtatcaagaagggatattgcaggaga
tcatcgagagagtctccagagcgaaggagaccagttgatgaagctttgtttatcgagaag
gcgtttgtagttgagagtctgagacagttttgggctgataaacatcgacctgtttcgttg
gatggatttatttgccacaaacaagaagctttgctacttaaacgactagcagctgatgaa
acgttatcgcacattttgctcaagggacctcccggttctgggaagaaaacattagcaatg
gctcttctacacgaagtttatggggattccattagcaatatatcgcatgatgtgagatac
tttcgtgttcaggaaactaagccagtgcaagtagttgttcctgtaacctcgagccctcac
cacgttgagctcaacgttcatttggagcgtaattctagatatgcgttaatggctttagtc
aagaatattagcactgaatatgcagctatcccggagatcagcaaggctaacatgaacatg
aaggcagatcataaagtacttgttctttatgatgtggataaggcgacgcagaacatacag
cacttaataaaatggatcatggattgttattcagactcttgcaagcttgttctatgctgt
gaagatgacacgaccatcgttgaatcagtaaagaacagctgcaaagttgttaaggttgaa
gctcctgtgactcatgaagtcatggaagttctgattcagattgcgagaaaagaaggcctt
gaactaccgatgagctttgctgctaagatagcggccaaatcaaagcaaaacctgagccaa
gcaattatggctctcgaagcctgcaatgcacacaattatcctttcaccgaggaccaacca
attccactgggatgggaattggctgtgctagaaatggctgcagaaattcttgctgatcct
tcacctaaaagagtgtttaccattcggggaaagctccaaaaacttttgctggagtttgtg
cacccaaagttgattctgctgaagctagttgaacagtttctaagaaggattgatcctagt
ttgagaagagaagtttattactggaatgcatattatgagaaacgactgccaaccggaaca
agtgctttactgaaattagaagaatttgtggccaaatttatgagcatatacagaaaaagc
tgtgggagtcaatatgcccaatag
DBGET
integrated database retrieval system
