KEGG   Ipomoea nil (Japanese morning glory): 109177705
Entry
109177705         CDS       T04663                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03013  Nucleocytoplasmic transport
ini03015  mRNA surveillance pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109177705
  09122 Translation
   03013 Nucleocytoplasmic transport
    109177705
   03015 mRNA surveillance pathway
    109177705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109177705
   03041 Spliceosome [BR:ini03041]
    109177705
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109177705
    TREX complex
     109177705
Spliceosome [BR:ini03041]
 Complex C
  Other components
   EJC/TREX
    109177705
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109177705
SSDB
Motif
Pfam: RRM_1 RRM_3 FoP_duplication
Other DBs
NCBI-GeneID: 109177705
NCBI-ProteinID: XP_019182682
LinkDB
Position
Un
AA seq 232 aa
MARGRGQGRPWRGRGSGGSLRGGRTTGAPRNRGPFDLHARPSSHTIAKSFHRTNNLPWQG
LRSTGLLSGLDTGTKLYVSNLDILVSNDDIRELFSEMGELIRYAIHYDKYGRTSGSAEVV
FARKGDAMKAVKRYNNVLLDGRPMKIEVIGNKAEFPLLTDVKVVGGVSGRQVLVNQARGP
AWTKGAAGGGAMQGSGQRGGGRLRNRRGRRQGRGWKKAAVDQSADDLDIELT
NT seq 699 nt   +upstreamnt  +downstreamnt
atggccagaggtaggggacaagggaggccatggcgtggaagagggtctgggggatcactt
agaggtggaagaactactggagctcctcgtaatagagggccatttgatctgcatgctagg
ccatcatctcacactattgccaagtctttccacagaacaaataacttgccgtggcagggc
cttagatctactgggttattgtcaggattagatactgggacaaagttatatgtttccaac
ttggacattctggtttctaatgatgacataagggaactcttttctgagatgggagaactg
ataagatatgcgatccactatgacaagtatggacgcaccagtggttcagccgaggtggtt
tttgcaagaaaaggtgatgcgatgaaagcagttaagagatacaacaatgtgctgttggat
gggaggcctatgaagattgaagtaattggcaacaaagcagaatttcctctgctaactgat
gtgaaagtggttggaggtgtgagtgggagacaagttctcgtgaatcaggcacgcggtcct
gcttggacaaaaggtgctgccggtggtggcgctatgcagggttctggccaaaggggtggt
gggagattgaggaacagacgtggccgacgccaaggtcgtggatggaagaaggcggctgtt
gaccagtcagccgatgaccttgacatcgagctaacttga

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