Ipomoea nil (Japanese morning glory): 109177776
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Entry
109177776 CDS
T04663
Name
(RefSeq) WD repeat-containing protein 82-B
KO
K14962
COMPASS component SWD2
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109177776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109177776
03036 Chromosome and associated proteins [BR:
ini03036
]
109177776
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109177776
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
109177776
COMPASS/SET1 complex (yeast)
109177776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
KNTC1_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
PQQ_2
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
109177776
NCBI-ProteinID:
XP_019182774
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MAGGQPEREDKVSLELTEEILQSMEVGVTFRDYNGRISSMDFHKTSPYLVTASDDESIRL
YDVATAACLKTINSKKYGVDLVSFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVASLSMCSRKECFISGSLDRTVMLWDQRAEKCQGLLRTQGRPATAYDEQGLVFAIAF
GGYIRMFDSRKYEKGPFEIFSVGGDVSDANVVKFSSDGKLMLLTTSDGKIHVLDSFRGTL
LSTYNVKPVSSDSTLDATFSPEGMFVISGSGDGSVYAWSVRSGKEVACWMSTDSEPPVIR
WAPGSLMYVTGSSELSFWVPDLSKLAAYVGRK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggacaaccggagagggaagacaaggtttcgctggaactaaccgaagagatt
ctacagagcatggaagtcggcgtcacctttcgcgattataatggaagaatcagttcaatg
gattttcataagacatcaccttacctggtcactgccagtgatgatgaatccattcgtttg
tatgatgttgcaacagcagcgtgtttgaagacaattaatagcaaaaagtatggtgttgat
ctggttagctttacttcccatccaacaactgtaatatactcttcaaagaatgggtgggat
gaatctctgcggcttctctcgttgcatgataacaaatatttgcggtatttcaagggtcat
catgacagggttgcctcacttagtatgtgctccagaaaggagtgctttatttctggctca
cttgatcgaactgttatgctctgggaccaaagagctgaaaaatgccagggccttctacgt
acacaaggaagaccagctactgcttatgatgagcaagggcttgtttttgcaattgctttt
ggtggatacataagaatgtttgattcacgcaagtatgaaaagggcccattcgaaatattt
tcagttggtggagatgtatctgatgcaaatgttgtcaagttcagtagtgatggcaaactt
atgcttttgacaacttcggacggaaaaattcatgtccttgattcattccgtggcacactt
ttgtcaacatataatgtcaagcctgtgtcatccgattcaaccttggatgcaacttttagt
ccagaaggaatgtttgttatatcaggttcaggggatggcagtgtctatgcttggagtgtt
cggagtggcaaagaagttgcttgttggatgagtacagattctgaacctccggttataaga
tgggctccaggaagcttgatgtatgttactggttcttctgaactatcattttgggttcca
gacttatcaaaattggctgcttatgtgggaaggaaatag
DBGET
integrated database retrieval system
