Ipomoea nil (Japanese morning glory): 109177908
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Entry
109177908 CDS
T04663
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109177908
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109177908
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
109177908
NCBI-ProteinID:
XP_019182944
LinkDB
All DBs
Position
Un
AA seq
695 aa
AA seq
DB search
MEKGGAGVWRRRRRRSWQQLMIVWLAIVFQMVLLTECSLKRQKIPKKHIHAEQESYPRVQ
LHRQEDYDGQVVVDNGLLRITFSTPGGQVNGIQYNGIDNLLETVHLEDNYRGYWDIVWNK
ADKPGIIIDKLEGSNFTIIMEDDDKVELSFTRTWDNTTSNGSNFPMNFDKRFVVLRGCSG
FYSYGIFERLDGWPDIDVYQGRIVFKLDQKLFQYMAVSDERQRIMPTAQDRKMGKVLDYP
EAVLLTNPQNSDLNGEVDDKYQYSVENKDNRIHGWINPDLPTGFWMITPSNEFRNGGPVK
QDLTSHTGPITLSMFFSTHYGGEKLGLKFRNGEPWKKVFGPVFMYLNSDSTNHLDLWADA
KEQMFIETENWPYNFPHSQDFYPPQQRGLVTGRLLVRDSYVSERLMTANSASVGLAAPGD
PGSWQVESKGYQFWTETDAEGYFLIKNVRPGNYSLYAWVPGFMGDYRYTSYITITPGSRT
RLENLVFDPPRIGPTLWEIGIPDRTAAEFFIPDPYPTLKNQLYSEDTSEKFRQYGLWDKY
TELYPDQDLVFAVGTRSYQIDWFFAHVNRYILGEEGNKTYVPTTWTIEFEVDNVDESGHY
TLWVALASAHEAELQIRVNDPEVEVPHFTTGFIGRDNAIARHGIHGLYWLFCVDVPGSLL
ATGTNSIFLRQIRGSSPWRGVMYDYIRLEAPPSND
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggcggcgccggagtgtggcggcggagacggcggcggtcgtggcagcagctt
atgattgtgtggctggcgattgtgtttcagatggttttgctcacagagtgttccttgaaa
cggcagaaaattccaaagaagcatatccatgcagaacaggaatcctatccacgggttcaa
ttgcatagacaggaagattatgatgggcaagtggtggtggataatggtctgctcagaatc
acattttctacccctggtggacaggtcaatggaatacagtacaatggaattgataattta
ctggaaactgtgcatttggaagataattacagagggtactgggacattgtttggaacaaa
gcagataaacctggtatcattattgataagcttgaagggagtaattttacaataataatg
gaagatgatgataaagtagagctttcattcactaggacatgggataatactacttctaat
ggctccaattttcccatgaactttgacaaaaggtttgtggtgttgcgtggatgcagtggg
ttttactcttatggtatttttgaacgtttagatggttggccagacatcgatgtctaccaa
ggacgaattgtgttcaagctcgaccaaaaattgttccaatacatggctgtgtctgatgag
aggcaaaggatcatgccaactgcccaagacagaaaaatgggaaaagttcttgattaccca
gaagctgttctcttgacaaatccacaaaactctgatctcaatggagaggttgatgacaag
taccaatattcagtggaaaacaaggataaccgaatccatgggtggataaatccagactta
ccaaccgggttctggatgatcactccgagcaatgagtttcgaaatggcggacctgtaaaa
caagatctcacttctcacaccggaccaatcactctatcaatgtttttcagcacacactat
ggtggagagaagttgggattaaagttcaggaatggagagccatggaagaaggtttttggc
ccagttttcatgtatttaaactcagattccaccaatcatcttgatctctgggctgatgca
aaggagcagatgttcatagaaaccgaaaactggccatacaatttcccgcactcacaagac
ttctatccacctcaacagcgaggcctagtaaccggccggttactagtccgggacagctat
gttagtgaaaggttaatgacagcaaattcggcttctgtggggcttgcagctccgggcgat
ccaggatcatggcaagtagaaagcaagggctatcagttctggactgaaactgatgcagaa
gggtatttcttgattaagaatgtgagaccagggaattacagcttgtatgcttgggtgcct
gggttcatgggagattacagatacacttcctacattacaatcacaccaggatcaagaacc
aggctggagaatctggtgtttgatcctcccagaataggtccaacgttgtgggaaatcggg
atccctgacaggactgctgcagagtttttcatcccagatccttatccaactctcaagaac
cagttatactcagaagacacttcagaaaagttcaggcagtatggattgtgggacaagtac
acggaactgtaccctgatcaggacttggtttttgcagttggaactcgcagttatcagatt
gattggttcttcgcccatgttaatagatatatactcggggaagaaggaaacaagacatat
gtgccgaccacatggacaattgagttcgaggttgacaacgttgatgagtctgggcattat
accctatgggttgcattggcatcagcacatgaagctgaattgcagattagagtgaatgat
ccagaggttgaagtcccacatttcacaactggtttcataggcagagacaatgcaattgcc
agacatgggattcatggcttgtactggctattctgtgttgatgttccagggtctcttctt
gccactggaaccaactcaatctttctcaggcagataagaggctccagtccttggagaggg
gtaatgtacgattacattcgtctcgaagcgcctccttcaaatgattag
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