Ipomoea nil (Japanese morning glory): 109178275 Help Entry 109178275         CDS       T04663                                  Name (RefSeq) uncharacterized LOC109178275   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03018   RNA degradation Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109178275  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109178275 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109178275   mRNA degradation factors    5'-3' decay     Decapping complex      109178275 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 TFIIA Motif Other DBs NCBI-GeneID:  109178275 NCBI-ProteinID:  XP_019183439 LinkDB All DBs Position Un AA seq 822 aa AA seqDB search MDGFEGPGGIECSSNPQDLKQVDSNSSGNALFDASQYAFFGNDVVEEVELGGLEDEEDDL PPPGFDDVEYQLEQEEGEMLASYSDVDDLTSTFSKQLNKVVGSPTKAAFFGDRESRESSS AADCVQEADFRDWFDQRGFDAERNEESKRWLSHPYSSSAHLIESKPLYRALSYPEQEQQL QHQQQRPQPRQHISSEAILIPKSSFTSFPPPGARLPQASPNNLPSTTYHPGGQPIPVSSP NFSPFSSPQNQMNAMHHGSQYGGVLPQFSAHGHQVHNRIQNQWMNQSTLNPGEHSTPPKN LMQQQLPHQNGLLPQQVPQQQTQQLGLQHPFQLPFGTSGMQSQRFNHHQPPTSQMNNFEM FGLADFKDQRTEPMLRGRQAAWYSPLGLGIRNQRSDSGWPKFKSKYMSTDEIENILRMQL AATHSNDPYVDDYYHQACLAKKSAGAKLKRHFCPTHLRDGSSQSRANTEAHAFLQVDALG RVSFSSIRRPRPLLEVDPPNSSATSSSEQKVSEKPLEQEPMLAARVTIEDGICLLLDVDD IDRFLQFSQTQLPDGGELLSRRRQMLLEGLASSLHLVDPLGKNGQSVDIAPKDDRVFLRI ISLPKGRKLLSRYLQLLFAGSELSRVVCMAIFRNLRFLFGVLPADHGAAETSKNLAKTVS LCVGDMDLKVLAACLASVVCSTEHPPLRPVGSPAGDGASIILKSVLERATELLRDPHAGA KCGMQNRAFWQASFDAFFGLLTKYCFNKYDSIMQSFLTQAPQNMVNNGSDAAIAISREMP VELLRASLPHTSDQQRKLLLDFTQRSMPVPSTGNQSGVNGGM NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atggacggatttgagggtccgggtggtattgaatgctccagcaatcctcaagatctcaaa caagttgattctaattcatcaggaaatgctctattcgatgcatcacagtatgcattcttt ggtaatgatgtagttgaagaagttgaattggggggattagaagacgaagaggatgatcta cctccacctggttttgatgatgtagagtatcagttggaacaagaagagggtgaaatgtta gcatcatattctgacgttgatgaccttaccagcacattttcaaagcagttgaacaaggtt gtcggtagccctacaaaggcagcattttttggtgatagagaatccagagaaagttcatct gccgctgattgtgttcaagaggcagattttcgtgattggtttgatcaacgtggctttgat gctgaacgcaatgaggagagcaaaagatggttgtcccatccttactcttcttctgctcat cttattgaatcgaagcctttgtacagagcactgtcataccctgagcaagaacaacagctg cagcaccaacagcagcggccgcagccacggcagcacatctctagtgaagcgatccttatc ccaaagtcttctttcacttcatttcctcctcctggtgcgcggcttcctcaagcttcacca aacaaccttcctagtactacatatcatcctggtggacagccaattccagtttcttcaccc aacttttctccgttttctagccctcagaatcagatgaatgccatgcatcatggatcacaa tatggtggagtcttacctcagttttcagctcatgggcatcaagtgcataatcgcattcaa aatcagtggatgaaccaatctactttaaaccctggagaacattctactccccccaagaat ttgatgcaacagcaattaccccatcaaaatggtttgttgccccaacaggtgccacagcaa caaacccagcaacttgggctgcaacatccattccagttaccctttggcacttcagggatg cagtcccaacgattcaatcaccatcaacctccaacatctcagatgaacaattttgaaatg tttggtttagctgattttaaagatcaaaggactgaacctatgctgagaggtaggcaggct gcatggtactctccactgggtttgggcatccgtaatcagagaagtgacagtggttggcca aaatttaaatccaagtacatgtcaacagatgaaattgagaatattcttcgaatgcagctt gctgccactcatagcaacgatccctatgtagatgattattaccatcaagcttgtttggcg aaaaaatctgctggtgcaaagttaaaacgtcatttctgcccaactcatctgagagatggc agctcccaaagtcgtgctaatactgaggcacatgcatttctccaggttgatgcacttggt agggtttccttctcctcaattcgcaggccacgcccacttcttgaggttgacccaccaaat tcatctgccactagtagcagtgaacagaaagtatctgaaaaacccttggaacaggagcca atgctcgcagctagggtgaccattgaggatgggatctgcctcctccttgatgttgatgat attgaccgcttcctacaatttagtcaaactcaactcccagatggaggggagctgttgagt agaaggaggcaaatgctgttggagggtctggcatcatcacttcatctagtcgatccactt ggcaaaaatggtcagtcagtggatatagcacccaaagatgatcgtgtattcttaaggatt atctcacttcccaaaggtcggaagctgttatcgcgatatcttcaacttctatttgctggc agtgaacttagtagggtggtgtgcatggccattttccggaatctgaggtttttgtttggg gtccttccagcagaccatggagctgctgagacaagtaaaaatttggcaaaaactgtttca ttgtgtgttggagacatggatctgaaagtacttgctgcctgccttgcatctgtggtttgt tcaactgagcatcctccactccgtcccgttggaagccctgctggtgatggggcttctata attctgaaatctgttctggagagggcaacagaactgttaagggatcctcatgctggtgcg aagtgcggcatgcaaaacagagcattctggcaggcgtcttttgatgctttctttggttta cttacaaagtactgctttaataaatatgactccatcatgcaatctttcctaacacaggcc ccacagaacatggtgaataatgggtctgatgcagccatagctattagcagggaaatgccg gttgaactcttgcgggcaagtcttcctcatactagtgatcaacagcgaaaactgctattg gattttacacaacggtctatgcctgtgccaagtactggtaatcaaagcggagtaaatggt ggcatgtga

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