Ipomoea nil (Japanese morning glory): 109179394
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Entry
109179394 CDS
T04663
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109179394
Membrane trafficking [BR:
ini04131
]
Autophagy
Other autophagy associated proteins
Others
109179394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
BCAS3_WD40
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
109179394
NCBI-ProteinID:
XP_019184434
LinkDB
All DBs
Position
Un
AA seq
419 aa
AA seq
DB search
MSTLSSPTSSTLSTSRGIIPPAGFGAYEDSMSAAPGPFGNTQSESSDTDETELHSVSWNQ
DYSCFAAGTSRGFRIYNCDPFKETFRRDIKSGGFGIVEMLFRCNILALVGARTNSQYPPN
KVIIWDDHQSRCIGEFSFRSEVRAVKLRRDRVVVVLEYKIYVYNFMDLKLLHQIETFENP
RGLCCLSHYSNTSVLACPGLRRGQVRVEHFGLNMTKLIKAHDSQVACLTLTMDGLLLATA
STKGTLIRIFNTMDGTQLQEVRRGVDKADIYSIALSPNVQWLSVSSDKGTIHVYSLRVRI
VGEDVATDSSTVGNQALLYQQHSSTALDALISPSTGANPGSSLSFMRGVLPRYFSSEWSF
AQFHLPECTQFISAFGSQNTVIIAGMDGSFYRCSFDPVNGGAMVQQEYVCFLKTESRPR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctactctgtcttctccaacgagttcaactttgtcaacgtctcgagggataattccc
ccagctggctttggtgcatatgaagattcaatgagtgcggctcctggaccttttggcaat
actcaatcagagtctagtgacactgatgaaactgagttgcattctgtatcatggaaccag
gattacagttgctttgctgctggcacaagtcgaggttttcgtatatataactgtgatccc
ttcaaggagactttcagacgtgatatcaaaagtggaggctttgggattgttgaaatgcta
ttccgttgcaatattttagcactcgttggtgctagaaccaattctcaatatcctccaaac
aaagttattatttgggatgatcatcaaagcaggtgcattggtgagttttcgtttaggtct
gaggttcgtgctgtgaaactacgacgggatcgcgttgttgttgttcttgagtacaagata
tatgtctacaattttatggatctaaaacttcttcatcagatagagacttttgagaatcct
agggggctttgctgcctgtcacactactcaaatacatcagtattggcttgtccaggcctt
cgacgaggacaagttcgtgttgagcattttggcctgaacatgacaaaattaatcaaggct
catgattctcaggtagcatgcttaaccttgacaatggatgggcttcttcttgccacggct
agcaccaagggcactttgataagaattttcaatacaatggatgggactcagttgcaagag
gtacgcagaggtgtagacaaagccgatatctacagtatagcactgtcaccaaatgttcag
tggttgtcggtttctagtgacaaaggtactattcatgtatacagcctaagagtgcgaatt
gttggggaggatgttgcaactgatagcagcactgttggaaatcaagcgctgttgtatcaa
cagcattcatcaactgcacttgatgctcttatttctccgagcaccggtgccaaccctggc
tcatcattgtctttcatgagaggggttttaccaaggtattttagctcggagtggtcattt
gctcagtttcacttgccagagtgtacccaattcatctctgcatttggttctcagaacact
gttattatcgctggcatggacgggagtttctacaggtgtagctttgaccctgtgaatgga
ggggctatggtgcagcaagaatatgtttgctttctgaaaacagagagtagacctagatag
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