Ipomoea nil (Japanese morning glory): 109179425
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Entry
109179425 CDS
T04663
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109179425
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109179425
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109179425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
AF_0924
MFS_2
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
109179425
NCBI-ProteinID:
XP_019184471
LinkDB
All DBs
Position
Un
AA seq
484 aa
AA seq
DB search
MFLSSSRQTCDLFSYFVCMSKIRAIRVLNFGIGAMLKLWVLFPLFFLCFAFLTAPPALAN
VVLIGRNVTSSFEDIEANFAPSAKGSGQCGTLYVAEPLDACSPLSNKVEVVENSTKSPFV
LIIRGGCSFEEKVKRAQVAGFKAAIVYDSEYGDLVAMAGSSSGIKIPAVFVSKASGETLA
TYAGDPNVEIWIIPSIENSAWSIMAISFISLLAMSAVLATCFFVRRHRVRRERPRTTRVR
EFHGMSSRLVKAMPSLIFTAVVEDNCTSMTCAICLEDYSVGDKLRVLPCRHKFHAMCVDA
WLTSWRTFCPVCKRDARTSTGDPPASESTPLLSSSASLSSMGSVRSSLASSSAIQIRSPS
SSRPPSRPQSISSTPYTHRHSLQSYIQSPHLTASRSSVDLRNASSSQRSRASYLVSPQNH
SLGGYPSMSPLNSRYMSPYIPSPGGNASTSYLGSSSRHPNPLRPSDSYTSFSPFASAQSL
PGCE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtttctatcatcctcgcgtcaaacctgtgatttgttctcatattttgtttgtatgtcc
aagataagggctattagggttttgaattttggaattggagctatgctgaaactctgggta
ttatttcccctctttttcttgtgttttgcgttcctgacggctcctcctgcccttgccaat
gtagttttgatcggtagaaacgttacctcttcattcgaagacatcgaggctaattttgct
ccctcggcaaagggatcagggcagtgcgggacattgtatgttgctgagccattggatgcg
tgctcaccgttgagtaataaagtggaggttgtagaaaacagcacaaagtctccgtttgtg
ttgataattaggggaggatgcagcttcgaggagaaagttaagagagcacaagtggcgggg
tttaaagcggccatagtctacgacagtgaatatggagatctagtggcaatggcaggaagt
tctagcggtataaagataccagcggtgtttgtttcaaaagcttctggagaaacacttgct
acatatgccggtgatcccaacgtcgaaatatggataatcccgagcatcgagaactcggcc
tggtcaatcatggctatatcattcatttcgctgcttgccatgtcagctgtgctagctact
tgcttctttgttcgtaggcatcgcgtcagaagagaaaggccacggactacacgtgttcga
gagttccacgggatgagtagccgtctcgttaaggccatgccgagtctaatatttactgca
gttgttgaggataactgtacgtcaatgacttgtgctatatgtcttgaagactatagcgtc
ggggacaagcttagggttctgccatgccgccataaatttcacgctatgtgtgtcgatgct
tggctaacatcgtggagaactttctgcccggtttgtaaacgcgacgctagaaccagcacc
ggtgatccaccggcgtcagagtctacaccgttgctttcatcgagtgcttctctatcgtca
atgggatctgttcgatcatcgttagcatcatcgtcggcaatacaaatacggtccccctcg
tcgtcccgacccccttcacgacctcaatcaatctccagcacaccttacacccaccgccat
tcacttcagtcctacatccaatcaccccatcttaccgcaagccggagctcggtggacctc
agaaacgcatcatcttcacaacgatcccgcgcttcttacctcgtttcgcctcagaatcat
tccctaggcggctacccttccatgtcgcctcttaactcgagatacatgtctccatacatt
ccaagcccggggggcaatgcttcaacaagttacctcggctcctctagtcggcacccgaac
ccactgcggccgagcgactcctatacgagcttttctccattcgcttcggctcagtccctc
ccgggttgtgagtag
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integrated database retrieval system
