Ipomoea nil (Japanese morning glory): 109179656
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Entry
109179656 CDS
T04663
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109179656
Enzymes [BR:
ini01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109179656
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Other ribosome biogenesis factors
109179656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
RrnaAD
Ubie_methyltran
Methyltransf_31
RsmF-B_ferredox
PCMT
ASPP2-like_RA
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
109179656
NCBI-ProteinID:
XP_019184694
LinkDB
All DBs
Position
Un
AA seq
496 aa
AA seq
DB search
MARKKPQARNAPAAMKQSKKSPGTETLAGKRLTNAERSAYFSRREAAKVLHTILQGDDRR
QAVGSIKSLVYGPSVRNKRATYALVCQTLKYLSIIKDILGASNVLNSKWKRREELIYIVT
YDILFGQEDSLVGDAEKFLLLRKDALQLALAQLLIRRGVKKVNELITPYKSDAQKPRYVR
VNTLKMDVESALLELRKQYVVQKDDMIPELLVCPPGTDLHNHPFVQTGSILLQGKASSMV
AASLGPKPGWEVIDACAAPGNKTVHLAALMKGQGKVIACELDEERFKRLKNTVKLAGAAN
VQVMHEDFLNLNPEDPSYSKVRAILLDPSCSGSGTAFDRLDHLLPSANAGAHDGFDMDRL
QKLANFQKRVLEHALRFPAVERIVYSTCSIHQIENEDVINSLLPFATSHGFQLETVFPQW
PRRGFPVMVGSENLLRTDLVTDKEGFFIALFSREGKYHSVKSMQMERNASLRNRPRARRH
LNLFFLKMFRTMWYAT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaaaaagccgcaagccagaaatgcgccggcggcgatgaaacagtcgaagaag
agtccggggactgaaactctggccgggaaacggctaaccaatgccgagcggtcagcttat
ttctcgcggagagaagccgctaaggtgttgcacaccatactacaaggagacgaccggcgc
caggcagtgggctccatcaagtcgctggtttacggcccctctgtcaggaacaagagagct
acttatgctcttgtgtgccagacgctcaagtatctttcaataatcaaggacatcttaggg
gcatctaatgtgttgaacagcaaatggaagagacgagaagagttaatatacatagtgaca
tatgacattctgtttggacaggaagactcattagttggtgatgctgaaaagtttctcctg
ctcagaaaggatgcattgcagttggctcttgctcagctcttaataagaaggggagtcaaa
aaagtgaatgagctgataactccttataaatctgatgctcaaaaacctcgttatgtccgt
gtaaataccctgaaaatggatgttgagtctgccttacttgagttgaggaaacaatatgtg
gttcaaaaggatgacatgatccctgaattgttggtatgcccacctggtactgacttgcat
aatcatccttttgtacaaactggaagtatccttttgcagggaaaggcaagttccatggtg
gctgcatcactgggacctaaaccaggatgggaggtcattgatgcgtgtgctgcacctggt
aacaaaactgtccaccttgctgctcttatgaagggacagggaaaggttattgcttgtgaa
cttgatgaagaaaggtttaaacgtttaaaaaacactgttaaattggctggggcagctaat
gtgcaagttatgcatgaggacttccttaacttgaatccggaagatccatcatattcaaag
gttcgtgctatacttttggatccatcttgctctggttctgggactgcttttgataggttg
gaccaccttctcccatcagccaatgcaggtgctcatgatggttttgacatggatagacta
caaaagcttgcaaatttccaaaagagagttttggaacatgcactgcgttttccagcagtc
gagagaattgtttacagtacctgctctattcaccaaattgagaatgaagatgttatcaat
tctctcctaccctttgccacgtctcatggatttcaactggaaacagtttttccccaatgg
cctcgtcgtggttttccagttatggttggatctgaaaatttgctgcgaactgacctggtc
acggacaaagaaggcttcttcattgctttattttcaagggagggaaaatatcattctgta
aagtccatgcagatggaacgaaatgcttctcttcggaatagaccgagggcacggagacat
ttgaatttgttcttcctcaaaatgtttagaacgatgtggtatgcaacttaa
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